| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3474 |
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| Symbol | metH |
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| ID | 4644762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 3687484 |
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| End bp | 3691239 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639806950 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_954275 |
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| Protein GI | 120404446 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCCG CTGACCCCAA CATCTGGGAG CCGAACATCC GTCCCGACTG CACCGACGAA
CTGAAGGTGG CTCTCGGCCG GCGGATCGTG GTGATCGACG GCGCGATGGG CACGGCGATC
CAGCGGGACC GGCCGGACGA GGCCGGCTAT CGGGGCGAGC GGTTCAAGGA CTGGCCGAGC
GATCTTGTGG GCAACAACGA CCTGCTCACC CTGACGCAGC CGCAGATCAT CGAGGGCATC
CACCGCGAGT ACCTCGAGGC GGGCGCCGAC ATCCTGGAGA CCAACACCTT CAACGCGAAC
GCGGTGTCGC TGTCCGACTA CGGCATGGAG AAGCTGAGCT ACGAGCTGAA CTACGCCGGT
GCCGCCCTGG CCCGCAAGGC CTGCGACGAG TTCAGCACCC CGGACAAGCC GCGCTACGTC
GCCGGCGCCC TGGGGCCGAC CACGCGGACC GCGTCGATCT CGCCGGACGT CAACGACCCC
GGAGCCCGCA ACGTCTCCTA CGACCAGCTG GTCGCCGCCT ACCTCGACGC CGCCAGCGGC
CTGGTCGACG GCGGTGCCGA CCTCCTCATC GTCGAGACGA TCTTCGACAC GCTCAACGCC
AAGGCCGCGG TGTTCGCCAT CGAGACGCTG TTCGAGGACC GCGGGCGCCG CTGGCCGGTG
ATCATCTCGG GCACCATCAC CGATGCGTCC GGGCGGACGC TGTCCGGCCA GGTCACCGAG
GCATTCTGGA ACTCCGTCAG ACACGCCAGG CCGCTTGCGG TCGGCCTGAA CTGTGCCCTC
GGCGCGCCGG AGATGAGGCC CTACCTCGCC GAGATGTCGC GGATCGCGGA CACCTTCGTG
TCCTGCTACC CGAACGCCGG CCTGCCCAAC GCCTTCGGCG AATACGACGA GTCCCCGACG
CGCCAGGCCG GTTACGTCGC CGAGTTCGCC GAGGCCGGCC TGGTCAACCT GGTCGGCGGT
TGCTGCGGAA CGACACCGGC GCACATCGCC GAGATCGCCA GGGTCGTCGA CGGCAAGCCG
CCGCGGAAGG TGCCGGAGAT CCCGGTGGCC ACCCGGCTGG CGGGCCTGGA GCCGCTCAAC
ATCACCGACG ACTCCCTGTT CGTGAACATC GGTGAGCGCA CCAACATCAC CGGCTCCGCC
CGGTTCCGCA ACCTGATCAA GGCCGAGGAC TACGACACCG CGCTGTCGGT CGCCCTGCAG
CAGGTTGAGG TCGGTGCGCA GGTCATCGAC ATCAACATGG ACGAGGGCAT GATCGACGGC
GTCGCCGCGA TGGACCGGTT CACCAAGCTG ATCGCGGCCG AGCCGGACAT CAGCCGGGTC
CCGGTGATGA TCGACTCCTC CAAGTGGGAG GTCATCGAGG CGGGCCTGAA GAACGTGCAG
GGCAAGCCGA TCGTCAACTC GATCTCCATG AAGGAGGGCG AGGAGAAGTT CATCCGCGAG
GCGCGGCTGT GCCGCAAATA CGGTGCGGCC GTCGTCGTGA TGGCCTTCGA CGAGCAGGGG
CAGGCCGACA ACCTGGAGCG CCGCAAACAG ATCTGCGGGC GGGCCTACCG GATCCTGACC
GAAGAGGTGG GCTTCCCGGC CGAGGACATC ATCTTCGACC CGAACTGCTT CGCGCTGGCC
ACCGGCATCG AGGAGCACGC GAGCTATGGG ATCGACTTCA TCGAGGCCTG CGCCTGGATC
AAGGAGAACC TGCCCGGGGT GCACATCTCC GGCGGCATCT CGAACGTGTC GTTCTCGTTC
CGCGGCAACA ACCCGGTCCG CGAGGCGATC CACGCGGTGT TCCTGTTCCA CGCCATCAAG
GCCGGTCTGG ACATGGGCAT CGTCAACGCC GGTGCGCTGG TGCCCTACGA CTCCATCGAC
CCCGAGCTGC GGGACCGCAT CGAGGACGTC GTCCTCAACC GTCGCGAGGA TGCGGCCGAG
AGGCTGCTGG AGATCGCGGA ACGGTTCAAC AGCAAAGGCG AGACCGAGGA CGCGGGGGTG
GCCGAGTGGC GATCTCTGCC GGTCCGCGAG CGGATCACGC ACGCCCTGGT CAAGGGCATC
GACGCGCACG TCGACGACGA CACCGAGGAA TTGCGGGCCG AGATCGCCGA CGCCGGTGGT
CGCCCGATCG AGGTGATCGA GGGCCCGCTG ATGGACGGGA TGAACGTCGT CGGTGACCTC
TTCGGCGCGG GCAAGATGTT CCTGCCCCAG GTGGTGAAGT CGGCCCGGGT GATGAAGAAG
GCCGTTGCCT ACCTGCTGCC GTTCATCGAG GCGGAGAAGG CGGAGAACGG GACGTCCGAT
TCGAAGGACA CCAACGGCAC GATCGTGATG GCGACGGTGA AGGGTGACGT TCACGACATC
GGCAAGAACA TCGTCGGGGT CGTCCTCCAG TGCAACAACT TCGAGGTGAT CGACCTTGGG
GTCATGGTGC CTGCCCAGAA GATCCTGGAC GCGGCGAAGG AGCACAACGC CGACATCATC
GGGCTGTCCG GGCTGATCAC CCCGTCCCTG GACGAGATGG CCAACTTCGC CGTGGAGATG
GAACGCGAGG GTCTGGAGAT TCCGCTGCTG ATCGGTGGCG CGACGACCTC GCGCGCACAC
ACCGCCGTGA AGATCGCCCC CCGTCGTGGC GGTCCGGTGG TGTGGGTCAA GGACGCTTCC
CGTTCGGTGC CGGTTGCTGC GGCGCTCCTC GACGACAGGC AGCGTCCGGC CCTGCTGGAG
GCCACCGAGG CTGACTACGC ATCGCTGCGC GAACGACACG CCCAGAAGAA CGAGCGCCCG
ATGCTGACGC TGGAGAAGGC CCGCGCGAAC CGGACTCCGG TCGAGTGGGA CGGCTACACG
CCTCCGGTGC CCGCCCAGGG GCTCGGCGTG CGGGAGTTCA AGGACTATGA CCTCGCCGAG
CTGCGCGAGT ACATCGACTG GCAGCCGTTC TTCAACGCCT GGGAGATGAA GGGCCGCTTC
CCTGACATCC TCAACAACCC GGCGACCGGC GAGGCTGCCC GCAAGCTGTA CGACGACGCC
CAGGAGATGC TCGACACCCT GATCAAGGAG AAGTGGCTGA CCGCCAACGG GGTGATCGGG
TTCTTCCCGG CGAACGCCAG CCCGGGCGGC GACGACATCG TGGTCTACAC CGACGACACC
CGTACCGAGG TGCTGACCAC GCTGCACAAC CTGCGCCAGC AGGGCGAGCA CCGCAGCGGC
ATCCCGAACC GGTCACTCGG TGACTTCATC GCCCCCAAAG AATCGGGTCT CCGGGACTAC
ATCGGCGCGT TCGCCGTGAC CGCGGGGCTC GGCAGCCAGG ACAAGATCAT GGAGTTCAAG
GCGGCCCTCG ACGACTACAG CGCGATCCTG CTGGAATCGC TCGCCGACCG GCTGGCGGAG
GCTTTCGCCG AACGGATGCA CGAACGGGTT CGCAAGGAGT TCTGGGGATA CCAGCCGGAC
GAGCAGCTGG ACAACGACGC ACTCATCGGG GAGAAGTACG TGGGAATCCG CCCTGCCCCC
GGCTACCCGG CCTGCCCGGA GCACACCGAG AAGGCGACGC TCTGGAAGTT GATGGACGTC
AAGGAGCGGA CCGGCATCGA GCTGACCGAG TCGATGGCGA TGTGGCCCGG AGCGGCCGTC
AGCGGCTGGT ACTTCTCGCA CCCGCAGTCG CAGTATTTCG TGGTCGGCCG GCTGGCCCAG
GACCAGGTCG CCGACTACGC GAAGCGCAAG GGCTGGACCC TGGCCGAAGC CGAGCGCTGG
CTCGCCCCCA ACCTGGGCTA CAACCCCGAG GACTGA
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| Protein sequence | MNSADPNIWE PNIRPDCTDE LKVALGRRIV VIDGAMGTAI QRDRPDEAGY RGERFKDWPS
DLVGNNDLLT LTQPQIIEGI HREYLEAGAD ILETNTFNAN AVSLSDYGME KLSYELNYAG
AALARKACDE FSTPDKPRYV AGALGPTTRT ASISPDVNDP GARNVSYDQL VAAYLDAASG
LVDGGADLLI VETIFDTLNA KAAVFAIETL FEDRGRRWPV IISGTITDAS GRTLSGQVTE
AFWNSVRHAR PLAVGLNCAL GAPEMRPYLA EMSRIADTFV SCYPNAGLPN AFGEYDESPT
RQAGYVAEFA EAGLVNLVGG CCGTTPAHIA EIARVVDGKP PRKVPEIPVA TRLAGLEPLN
ITDDSLFVNI GERTNITGSA RFRNLIKAED YDTALSVALQ QVEVGAQVID INMDEGMIDG
VAAMDRFTKL IAAEPDISRV PVMIDSSKWE VIEAGLKNVQ GKPIVNSISM KEGEEKFIRE
ARLCRKYGAA VVVMAFDEQG QADNLERRKQ ICGRAYRILT EEVGFPAEDI IFDPNCFALA
TGIEEHASYG IDFIEACAWI KENLPGVHIS GGISNVSFSF RGNNPVREAI HAVFLFHAIK
AGLDMGIVNA GALVPYDSID PELRDRIEDV VLNRREDAAE RLLEIAERFN SKGETEDAGV
AEWRSLPVRE RITHALVKGI DAHVDDDTEE LRAEIADAGG RPIEVIEGPL MDGMNVVGDL
FGAGKMFLPQ VVKSARVMKK AVAYLLPFIE AEKAENGTSD SKDTNGTIVM ATVKGDVHDI
GKNIVGVVLQ CNNFEVIDLG VMVPAQKILD AAKEHNADII GLSGLITPSL DEMANFAVEM
EREGLEIPLL IGGATTSRAH TAVKIAPRRG GPVVWVKDAS RSVPVAAALL DDRQRPALLE
ATEADYASLR ERHAQKNERP MLTLEKARAN RTPVEWDGYT PPVPAQGLGV REFKDYDLAE
LREYIDWQPF FNAWEMKGRF PDILNNPATG EAARKLYDDA QEMLDTLIKE KWLTANGVIG
FFPANASPGG DDIVVYTDDT RTEVLTTLHN LRQQGEHRSG IPNRSLGDFI APKESGLRDY
IGAFAVTAGL GSQDKIMEFK AALDDYSAIL LESLADRLAE AFAERMHERV RKEFWGYQPD
EQLDNDALIG EKYVGIRPAP GYPACPEHTE KATLWKLMDV KERTGIELTE SMAMWPGAAV
SGWYFSHPQS QYFVVGRLAQ DQVADYAKRK GWTLAEAERW LAPNLGYNPE D
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