Gene Mvan_3409 details

Gene Information

• Locus tag: Mvan_3409
• ID: 4646019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium vanbaalenii PYR-1
• Kingdom: Bacteria
• Replicon accession: NC_008726
• Strand: +
• Start bp: 3624535
• End bp: 3625218
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639806886
• Product: LppI
• Protein accession: YP_954211
• Protein GI: 120404382

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0546713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.306915
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGGATAG CGGCCTTGAT CGCGATGAGC GCCCTGGTGG CGGCCTGCTC CCAGTCGGTG 
GGCGGCGAGG CCGAATCCTC GCGGCCGTCC GCCGCCACGC CCCCGGTCAC CACGTCGCCT 
GCGCCCACAC CGCCTGCGTC GCAGCAGCCC ACCGCAGCTC CGGCCCAGGG CGCGTCGATC 
GACGACGTCA TCAGCTGGAT CGGAGCGGGC ACACCCACGG ATCCGGCCGG CTACCACGTC 
GCATTCCGCG ACGGTGTGAC CACCCGACTC GGTGAGGACA TCGCGTTCAC GGCCCCGTCG 
GGGGCGCCGC ACTCCAGCAC CCAGTGCATC ACCTCCGGCG GTGCGTTGAC CTGTCTGCTC 
GACCTCACCG CGCCGCCGCC TCGACCCGCG CAGGCCGAGG GCGCGTGGAA GCCGGGCTGG 
GTGGAGTTCA CGGGCACCGG GCTGTCGGTC GGCTCGCTGC GCGGCGACCC CGGCCCGTTC 
CTCAACGGGG CGGGAGCCCA GCTGCCCCCC GGGCAGTCGT TGACGTTCGG CGACAACCGC 
TGCCGCGGCG ACGCGACCGG CCTGCTCTGC GTCAACTATG CGCATCGGTC GGCGGTCCGT 
CTGGCCGCCG ACGGCGTGGT GGCGTACGGC TGCCTGGCCG AGGTGACCCC GCCACCGGAG 
TCGGCGGCGG CGTACAGCTG CTGA 

 

Protein sequence

MRIAALIAMS ALVAACSQSV GGEAESSRPS AATPPVTTSP APTPPASQQP TAAPAQGASI 
DDVISWIGAG TPTDPAGYHV AFRDGVTTRL GEDIAFTAPS GAPHSSTQCI TSGGALTCLL 
DLTAPPPRPA QAEGAWKPGW VEFTGTGLSV GSLRGDPGPF LNGAGAQLPP GQSLTFGDNR 
CRGDATGLLC VNYAHRSAVR LAADGVVAYG CLAEVTPPPE SAAAYSC