Gene Mvan_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3071 
Symbol 
ID4646977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3239811 
End bp3240443 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content72% 
IMG OID639806548 
Producthypothetical protein 
Protein accessionYP_953879 
Protein GI120404050 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.767749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCGA ACTGGCCGGA TGACGACGAA CCGAAGCCCG CGCCGCAGCC CCTGCGGCGT 
ATCCAGGCGC TCGTCAACAC GGTGGAACGG CCCGACGGCG CCGATCGCCT TGCCGACCCC
TCCGACGCAC GGCCGTGGAT GATCGCCAAC GGGCTGTTGG CGCCGTCGGC CGAGTTGACC
GCCGCCGACC TGGCGCTGGC CATCGAGGTG CGTGAAGCGT TGCGGGCGTT GCTGATCCAC
AACGCGGGAG GTCCCCGGCC GGGGCCCGAG GCGGTGGCCC CACTGCAGCG GATCGCGGCG
AAGGGCCGGC TGCAGGCAGC GGTCGGGGAC GGAGGTGTGG TGACGTTGCG GGTCGACGGC
GACAGCGTGG CCGATCGGCT CGCCGGCCTG CTTCCGGTGA TCCGCGACGG GCAGCGCGAC
GGCACCTGGG CGCTGCTCAA GGCGTGCGGT AACGACGAAT GCCGGTGGGT GTTCTACGAC
TCCTCCCGCA ACCACGGCGG CACATGGTGC GACATGGCGT CCTGCGGTAA CAAGCTCAAG
AACCGGCAGT TCCGTGCGCG CAGGCGCGCC GACGGGCCGT CAGGACAGGT GCCACACCAG
GGCGGCGGCC AGCGCGCCCA GCCCGTTGAG TGA
 
Protein sequence
MRANWPDDDE PKPAPQPLRR IQALVNTVER PDGADRLADP SDARPWMIAN GLLAPSAELT 
AADLALAIEV REALRALLIH NAGGPRPGPE AVAPLQRIAA KGRLQAAVGD GGVVTLRVDG
DSVADRLAGL LPVIRDGQRD GTWALLKACG NDECRWVFYD SSRNHGGTWC DMASCGNKLK
NRQFRARRRA DGPSGQVPHQ GGGQRAQPVE