Gene Mvan_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3023 
Symbol 
ID4647205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3189161 
End bp3189583 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content66% 
IMG OID639806501 
Productthioesterase superfamily protein 
Protein accessionYP_953832 
Protein GI120404003 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.26011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.566778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGT TCTCGCTGGT GATCGGCCCC CGTTATGCCG AGATCGACCA GCAGGGCGTG 
GTGTTCAACG GCCACTACCT GACATGGTTC GACGAGGCCT GCACCGGCCT GCTCGAGTCG
CTGGGGGTCT CATATCCGCA GTTGATGGCG GGAGGCCACG ACTTCCAGGT GGTGCACTCC
GAAATCGACT TCACGGCCTC GGTGCGATGG CGTGACGAGG TGCGGGTGAG CGCACAGTGC
GCGCGGATCG GTTCGACGAG TTTCACCATC GGGTTCACCG TGTTCGCCCG GACCGGCGGA
GACGACGAGC GTGTGGCGGT ACGCGGGCAC AACGTCTACG TCGTGGTGTC GACCACGGAT
TGGGCCAAGC GCCCGATCCC CGACGATCTG CGGCGTGCGT TGACCGGACC GCAGCAGCGC
TGA
 
Protein sequence
MTEFSLVIGP RYAEIDQQGV VFNGHYLTWF DEACTGLLES LGVSYPQLMA GGHDFQVVHS 
EIDFTASVRW RDEVRVSAQC ARIGSTSFTI GFTVFARTGG DDERVAVRGH NVYVVVSTTD
WAKRPIPDDL RRALTGPQQR