Gene Mvan_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2960 
Symbol 
ID4649166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3129859 
End bp3131400 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content69% 
IMG OID639806441 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_953772 
Protein GI120403943 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.958907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.385135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTCCT TGACCATCCC TGCCCTGCTG TCGGCCGCTG TGCGCGCTCG TGGAGAGCGC 
ATCTACCTGG TGACGCCGAC CGAGCGGCTC ACCTATGCCG CAGCCGAGCG CCGGTCGGCC
GAGCTGGCTC GCTGGCTGTT GGGGCAAGGC GTCGGCAAAG GCACCAGGGT CGGACTGTTC
TTCCCGAACG GGGCGGAGTG GGTGACGTGG TGGCTGGCGG TGTCGCGTGT CGGGGCCGTC
GCGGTTCCGC TGAGCACGAT GTACCGGCCC GCTGAGATCG CCAAGGTGAT CCGACTGGCC
GACGTCGCAC TGTTGATCGG GCCCACCCGG ATCCTCGACA TCGACGTCGT CTCGCGGTTC
GAGGAGGCGC TGCCGGAGTT GAGCGGCCAC GATGGGCCGC GGTTGGCGCT GACCGAGGCG
CCGTTCCTGC GGCGCATCGC ACTCACCGGA CCAGTGGCCG CCCCGTGGGC GACCACCATC
GACGACGCCG ACTCGGTGCC CTCGCGCGTC CAGGCGGCCG CCGAAGCCGA GGTGTCTCCC
GCCGACCTCG CGATCATGGT GCACACGTCG GGATCCACCG CGGACCCCAA GGGGGTCATG
CACACCCACG GCACCGTCGT CCGTCAAACC TCGACCTGGC CGGCCGCGGT ACGGGCGATC
ACCGGTTCTG ACGCCGACCC GGTGATCCTG TGCGCGATGC CGTTCTTCTG GATCGGCGGG
GTCCTCGCCG CGACCGGCGC ACTGCACGAA CCCGTCACGC TGCTGGTGAT GCCCAAGCTC
GACGCGGAAA CCGCACTGGA TCTCGCGGAG AACGAGAAGG CCACCGGGAT CGTGGGCTGG
CCCGCCTTCA CCCAGCGGAT GCGCGAGCAC CCCAGCTTCG CCGACCGGGA TCTGTCCTCG
GCACCGATGC TGCGCGACGG ACCGCTCGAC ATCGCGATGA CCGATGTGCC CGACGGGTTT
CCGGTGCACC GCACCATGTC TGAGACCGCG GGCGGGTTCG CCCACACCGA GATGAAGATC
GTCGACGACG CAGGGATGCC GGTCGCCGCG GGGGTGGTCG GCGAGCTGCT TGTCCGCGGC
GTCGGGGTGA TGGCGGGGTA CAACAAGCGC GAACGCAGTG ACACCTTCGA CGCCGACGGC
TGGTATCACA CCGGTGACCG GGTGTACCGC AGGGCGGACG ACCCCCGCCT GTTCTTCGTG
GGCCGCACCG GCGAAATGAT CAAGACGTCC GGTGCGAACG TCTCACCGCT GGAGGTCGAG
GCGGTGATCG AGACGTTCGA CGACATCGCG CAGTGCGTGG TTGTCGGCGT CGAGCACGCC
GACAGAGGTG AGGAGGTCTG CGCCGTGCTG GTGCCGGTGG GGAACGAGGT CGACGTGGAT
TCGGTAGCAC GCCGTACCCG CGAGGCGTTG TCGTCCTACA AGGTGCCGAC GCGGTGGGTC
ATCGCGTCGA GTGAACAGAT ACCCACGCTG CCCAGCGGCA AGCTCGACCG CAGGGCCGTG
CGGGCGTTGA TCGTCAGTTC TGGGGCGGCG AAAGCTGATT GA
 
Protein sequence
MDSLTIPALL SAAVRARGER IYLVTPTERL TYAAAERRSA ELARWLLGQG VGKGTRVGLF 
FPNGAEWVTW WLAVSRVGAV AVPLSTMYRP AEIAKVIRLA DVALLIGPTR ILDIDVVSRF
EEALPELSGH DGPRLALTEA PFLRRIALTG PVAAPWATTI DDADSVPSRV QAAAEAEVSP
ADLAIMVHTS GSTADPKGVM HTHGTVVRQT STWPAAVRAI TGSDADPVIL CAMPFFWIGG
VLAATGALHE PVTLLVMPKL DAETALDLAE NEKATGIVGW PAFTQRMREH PSFADRDLSS
APMLRDGPLD IAMTDVPDGF PVHRTMSETA GGFAHTEMKI VDDAGMPVAA GVVGELLVRG
VGVMAGYNKR ERSDTFDADG WYHTGDRVYR RADDPRLFFV GRTGEMIKTS GANVSPLEVE
AVIETFDDIA QCVVVGVEHA DRGEEVCAVL VPVGNEVDVD SVARRTREAL SSYKVPTRWV
IASSEQIPTL PSGKLDRRAV RALIVSSGAA KAD