| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2546 |
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| Symbol | |
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| ID | 4645427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2686046 |
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| End bp | 2687731 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639806031 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_953363 |
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| Protein GI | 120403534 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAAAAC GTTTACGCAC CGTGTGGAGG AGTTCGCCCG TGGCCCCCGA AGAGTCGCCC
TGGTGGCAGA CCGCCGTCGT CTACCAGGTC TACATCCGCA GCTTCGCTGA TGGAAACGGC
GACGGCGTCG GCGACATCGC GGGTCTGCGG GCCAGGCTGC CGTATCTGGC GCGGCTCGGT
GTGGATGCCA TGTGGATCAA CCCGTGGTAT CCGTCGCCGA TGGCCGACGC GGGGTACGAC
GTAGCCGACT ACCGCGACAT CGAGCCGGCC TACGGCACCC TCGAGGATGC GCGGGCGCTG
ATCGCGGAGG CGCACGCTCT CGGAATCCGG GTGATCCTCG ACATCGTCCC CAATCACACG
TCCGACCAGC ACGCGTGGTT CCGTGCCGCC CTCGCCGGCG AGTCCGGCGC CCGGCGGCGC
TACCACTTCC TGGCTGGGCG GGGTGCCGAC GGTGAGCTGC CGCCCAACGA CTGGCAGAGC
GTCTTCGGGG GCCCGGCGTG GACGCGGGTG GACCGTGGTC CGCTGGAAGG CCAGTGGTAT
CTGCATCTGT TCGCTCCCGG CCAACCGGAC CTGAACTGGG AGAACGACGA GGTCCGTGCG
GAGTTCGAGG ACATCCTGGC GTTCTGGTTC GACCGTGGTG TCGACGGTTT CCGCATCGAC
GTGGCGCACG GGCTGGTCAA AGCGGCGGGC CTGCCCGACG GGGCGGGCGT CGATGCGGAG
CCGCACACCC TCCTGCAGGT CCAGGGCCGC CACCCCGCCT GGGATCAGGA CGGCGTGCAC
GACATCTACC GCGGCTGGCG GGCGGTGGCC GACCGCTACG CGCCCGAGCG GATCTTCATC
GCAGAGGCGT GGGTGTCCAG CAACGCCCGG CTGGCCCGCT ACCTGCGGCC CGACGAACTG
CACACCGCGT TCCAGTTCGA CTTCCTGCGC ACCCCGTGGC GTGCGCAGAT GCTGCGCGAG
GTCATCGACG ACGCGATCGA TTCGGCCGCG TCGGTCGGCG CGCCGCCCAC CTGGGTGCTG
TCCAACCACG ATGTCACCCG CACCGTGACA AGGTTCTCCC GCTCGCAGCC CGCCCACCTG
ATCGAGACGG ACTGGGAGCG GGGCCGTTGG GAGGACGAAC GGCCCGACCA TGCCCTCGGG
CGCAGGCGTG CCCGCGCCGC GGCGCTCGTG CAGCTCGCGT TACCGGGAAC GGCCTACGTC
TACCAGGGTG AGGAACTCGG CCTCGAGGAG GTCGAGGATC TGCCCGACGA GGCGCGTCAG
GACCCGACGT GGGTGCAGTC CGGATTCACC GACGTCGGTC GGGACGGGTG TCGGATCCCG
TTGCCCTGGA CCGAAACGTC GGTGCCCTAC GGATTCGCGG CACACCCCGC AGCGGTGACG
TGGTTGCCGC AGCCCGAGCA CTGGGCCGAG CACAGCGTGG AAGCGCAGGA GCGCGATCCG
GGTTCGACGC TGAACCTGTA CCGCTCCGCC CTGGAACTCC GCCCGACGAT GTGGCGTGAC
ACCGGGGACG TCAAGTGGCT CGAGGTGGCG TCCGACATCG CGGCGTTCGA GCGCGGGGGA
GCGCAGTGCT GGGTCAACAC CGGCGACGCC GGCGTGCCGC TGCCGGCCGG AGCGGCGGTG
GTGCTGGCCT CGGAGCCCGG GGTCGACGGC ATGCTGCCGC CGGACACCGC GGTGTGGTTG
CGGTAG
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| Protein sequence | MRKRLRTVWR SSPVAPEESP WWQTAVVYQV YIRSFADGNG DGVGDIAGLR ARLPYLARLG
VDAMWINPWY PSPMADAGYD VADYRDIEPA YGTLEDARAL IAEAHALGIR VILDIVPNHT
SDQHAWFRAA LAGESGARRR YHFLAGRGAD GELPPNDWQS VFGGPAWTRV DRGPLEGQWY
LHLFAPGQPD LNWENDEVRA EFEDILAFWF DRGVDGFRID VAHGLVKAAG LPDGAGVDAE
PHTLLQVQGR HPAWDQDGVH DIYRGWRAVA DRYAPERIFI AEAWVSSNAR LARYLRPDEL
HTAFQFDFLR TPWRAQMLRE VIDDAIDSAA SVGAPPTWVL SNHDVTRTVT RFSRSQPAHL
IETDWERGRW EDERPDHALG RRRARAAALV QLALPGTAYV YQGEELGLEE VEDLPDEARQ
DPTWVQSGFT DVGRDGCRIP LPWTETSVPY GFAAHPAAVT WLPQPEHWAE HSVEAQERDP
GSTLNLYRSA LELRPTMWRD TGDVKWLEVA SDIAAFERGG AQCWVNTGDA GVPLPAGAAV
VLASEPGVDG MLPPDTAVWL R
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