| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2442 |
|---|
| Symbol | |
|---|
| ID | 4647686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2598451 |
|---|
| End bp | 2599059 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639805925 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_953261 |
|---|
| Protein GI | 120403432 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.531089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.113851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTTG TCGGGAACTT GTCGGGGCGT CGCGGTACCT TTCGCAACAG TTCGATCACG
TGTTCTATAA ATCGAACACC TGATCGACTA GTATTCGAAC ACAAGAGCGA ATACCGGCCC
AGATCGAAAG GCGAGCAGAT GACCATTCTC GACGATCGCG AAACGTGGAA CGAGTTCGAG
CGGGCGCCCC GGCTGCAGGT CGGCGGCGGT CGGGTACGCC CGGTGGTTCC GGTGCGCAGG
TCACCGTCAC GGCGCCCCGG TGGGGCTCCG GTGCGCTACC GGGGGACGGG CGTGCTGGTG
TCGCGGGCGC CGCACCGGCG CCGCCCGATC ACGCCCGCGA CCACGGTGTT GTTGGCGCTG
GTCGCCGCGG CGATCACCCT GTGGCTCGGC CTCGTGGGCC AGTTCGGCGA GCTGGTCGGC
GATCAAGCAG AGATCCCGGG CCGGCTGGCG GTGGTCCAGG TGCAAAGTGG TGAGTCGCTG
CAGCACGTCG CGCAGCGGGT GGCCCCAGAT GCCCCGGTCG CCGACGTCGT CGACCGCATC
CGCGAGTTGA ACAAGCTGGA ATCGGTCGCG CTGGACGCCG GGCAGACGCT CATCGCCCCG
GTCGCCTGA
|
|---|
| Protein sequence | MELVGNLSGR RGTFRNSSIT CSINRTPDRL VFEHKSEYRP RSKGEQMTIL DDRETWNEFE
RAPRLQVGGG RVRPVVPVRR SPSRRPGGAP VRYRGTGVLV SRAPHRRRPI TPATTVLLAL
VAAAITLWLG LVGQFGELVG DQAEIPGRLA VVQVQSGESL QHVAQRVAPD APVADVVDRI
RELNKLESVA LDAGQTLIAP VA
|
|---|
| |