Gene Mvan_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2408 
Symbol 
ID4644830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2563313 
End bp2563567 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content72% 
IMG OID639805892 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_953228 
Protein GI120403399 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.349074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCCTGG GGATTCCCGG ACAGGTCGTC GGCATGCTCG ACGGCTACGG CGACCAACTG 
GCGCTGGTCG ACGTGGCCGG CGAGCACCGC AGGGTCAACG TCGGGATGCT GCCCGAGGAG
CGCTTCGCGC CCGGCGACTG GGTGATCATC CACATGGGCT TCGTGGTCGA GAAGACCGAC
AAGGCCGGCG CAGACGCGGC GTGGGCCGGC CTCGAGCTGA TGGGCAGGGG CCCGGGCGAC
GGGGACCCGC CGTGA
 
Protein sequence
MCLGIPGQVV GMLDGYGDQL ALVDVAGEHR RVNVGMLPEE RFAPGDWVII HMGFVVEKTD 
KAGADAAWAG LELMGRGPGD GDPP