Gene Mvan_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2387 
Symbol 
ID4644584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2543424 
End bp2544335 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID639805871 
Productdihydrodipicolinate synthase 
Protein accessionYP_953207 
Protein GI120403378 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0117065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTGA GCACCAGCGG ATTCGACGCC CCAGCCCGGT TGGGCACCCT GTTGACCGCA 
ATGGTGACTC CGTTCAAGCC CAACGGTGCA CTGGACACCG ACACCGCGGC CCGGCTGGCG
AATCACCTGG TCGACGCGGG CTGTGACGGG ATCGTGGTGT CCGGCACCAC GGGAGAGTCG
CCCACCACCA CCGACGACGA GAAGATCGCG CTGCTGCGCA CGGTGCTGGA AGCGGTCGGC
GACCGGGCCA GGGTCATCGC GGGCGCGGGC ACCTACGACA CCGCCCACAG CGTGCGGATG
GCGAAGGCCA GTGCCGCGGA GGGCGCGCAC GGTTTGCTGG TCGTCACGCC GTACTACTCA
CGTCCGCCGC AGGCCGGGCT GGCGGCCCAT TTCACCGCCG TCGCCGACGC CACCGACCGG
CCCGTCATCC TCTACGACAT CCCCCCGCGC TCGGTGGTGC CGATCGAGTG GGAGACCATC
CGCGCGCTGG CCGGCCATCC GAACATCGTC GCCATCAAGG ACGCCAAGGG TGACCTGCAC
GGTGGAGGCC AGATCATCGC CGAGACCGGG CTGGCCTACT ACTCCGGCGA CGACGCGCTG
AACCTGCCGT GGCTGGCGAT GGGCGCCGTC GGTTTCATCA GCGTCTGGGG CCATCTGGCC
GCCAGTGCGC TGCGGGACAT GATGACGGCC TTCGCTTCCG GCGACATCGC AACCGCACGC
AAGATCAACG TCACGCTCGG ACCGTTGTCC CAGGCCCAGG CGAGACTCGG GGGGGTCACG
TTGTCGAAGG CCGGTCTCCG GCTGCAGGGA TTCGAGGTCG GCGAGCCGAG GTTGCCGCAG
ATTCCGGCCA CCGACGAACA GGTCGAGGAG CTCGCCGCCG ACATGCGCGC AGCCGGGGTG
CTGCGGCAGT GA
 
Protein sequence
MPVSTSGFDA PARLGTLLTA MVTPFKPNGA LDTDTAARLA NHLVDAGCDG IVVSGTTGES 
PTTTDDEKIA LLRTVLEAVG DRARVIAGAG TYDTAHSVRM AKASAAEGAH GLLVVTPYYS
RPPQAGLAAH FTAVADATDR PVILYDIPPR SVVPIEWETI RALAGHPNIV AIKDAKGDLH
GGGQIIAETG LAYYSGDDAL NLPWLAMGAV GFISVWGHLA ASALRDMMTA FASGDIATAR
KINVTLGPLS QAQARLGGVT LSKAGLRLQG FEVGEPRLPQ IPATDEQVEE LAADMRAAGV
LRQ