Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2317 |
Symbol | |
ID | 4644352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2474923 |
End bp | 2476251 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639805801 |
Product | MATE efflux family protein |
Protein accession | YP_953137 |
Protein GI | 120403308 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.816192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0947968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCTGAGC CCGTCGCCCC GGCGAGCAGT CGCCGGATCG CCGCGCTCGC CTTTCCGGCG CTCGGCGTGC TCGCCGCCGA ACCCATCTAC CTGCTGTTCG ACCTCGCGGT CATCGGCAGG CTCGGCGCAC TGAACCTGGC CGGGCTGGCG ATCGGCGCGC TGATCATGGG CGTGTTGAGC TCGCAGCTGA CATTCCTGTC CTACGGCACC ACGGCCCGCG CCGCGCGGTT CTACGGCGCC GGCAACCGCA CCGCCGCGGT CGAGGAGGGG GTGCAGGCCA CCTGGCTGGC GCTGGGCATC GGCACCACCA TCGTCGTCGC CGTGCAGCTG ACCGCGGTGC CCCTGGTGTC GGTGTTGGCC GGTGGGGCCG ACCACGGTCG CATCGCCGAG ACCGCGCTGC CCTGGGTGCG AATCGCCAGC CTGGCCGTAC CCGCGATCCT GATCGCCGCC GCCGGAAACG GGTGGATGCG CGGCGTGCAG GACACGATGC GCCCACTGCG CTATGTGATC TTCGGGTTCG CGGTGTCGGC GGTGCTGTGC CCGCTACTGG TGTACGGCTG GCTGGGCGCC CCCGAACTGG GTCTGCCCGG CTCGGCGGTG GCCAACGTGG TGGGGCAATA CCTGGCGGCG GCGCTGTTCT GCCGGGCGCT GGTCGTCGAG AAGGTGCCGT TGCGACTGCG GCCGCCGGTG CTGCGCGCCC AGGTGGTGAT GGGCCGTGAC CTGGTGCTGC GGACCATGGC GTTCCAGGCC TGCTTCATCT CGGCGGGGGC GGTGGCCGCC CGGTTCGGCG CCGCCGCCGT CGCCGCGCAC CAGGTGGTGC TGCAGCTGTG GAATTTCCTT GCGCTGGTGC TGGATTCACT GGCCATTGCG GCACAGTCGC TGGTCGGCGC GGCGCTCGGT GCGGGCCAGC TGACCCACGC GAAAGCGGTG GCCTGGCGGG TGACGATCTT CTCGACGGTG GCCGGTGTGG TGCTGGCCAC GGTGTTCGCG TTGGGTTCCT CGGTGTTCCC GGCGGTGTTC ACCGACGACC GATCGGTGCT GGACCAGATC GGGGTGCCGT GGTGGTTCCT GGTGGCCCAA TTGCCGGTCG CGGGAATCGT TTTCGCGATC GACGGGGTGC TGCTCGGGGC CGGCGACGCC ACGTTCATGC GCAACGCGAC GCTGATCAGC GCGTTGGTGG GATTCCTGCC GCTGATCTGG TTGTCGCTGG CGTTCGGCTG GGGGTTGCTC GGTATCTGGG CCGGGCTGAG CGCGTTCATG GTGTTGCGAC TGGTGTTCGT CGGCTGGCGC GCACTGTCGG GTCGCTGGCT GGTGCCCGGA ACCCGCTGA
|
Protein sequence | MAEPVAPASS RRIAALAFPA LGVLAAEPIY LLFDLAVIGR LGALNLAGLA IGALIMGVLS SQLTFLSYGT TARAARFYGA GNRTAAVEEG VQATWLALGI GTTIVVAVQL TAVPLVSVLA GGADHGRIAE TALPWVRIAS LAVPAILIAA AGNGWMRGVQ DTMRPLRYVI FGFAVSAVLC PLLVYGWLGA PELGLPGSAV ANVVGQYLAA ALFCRALVVE KVPLRLRPPV LRAQVVMGRD LVLRTMAFQA CFISAGAVAA RFGAAAVAAH QVVLQLWNFL ALVLDSLAIA AQSLVGAALG AGQLTHAKAV AWRVTIFSTV AGVVLATVFA LGSSVFPAVF TDDRSVLDQI GVPWWFLVAQ LPVAGIVFAI DGVLLGAGDA TFMRNATLIS ALVGFLPLIW LSLAFGWGLL GIWAGLSAFM VLRLVFVGWR ALSGRWLVPG TR
|
| |