| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2199 |
|---|
| Symbol | |
|---|
| ID | 4646301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 2345146 |
|---|
| End bp | 2347734 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639805684 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_953020 |
|---|
| Protein GI | 120403191 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0560008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.885424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCGC TGGTCGATCA TCTGCGCAGT CACGGTGACC GTCCTGCGGT GCTCACCGCG
GACCAGCCGC TCAACTACCG CGAACTCGCC GAGATGGTCG AGAGCTTCGC ACACACGCTC
GGACGGCGAC GCCGGCTGGT GCTGCTGGAA ACCCGCAACG ATGTCGCGAC GGTCGTCCGC
CACCTGGGCG CGTTGGCCGG TCGCCATGTT GTCCTCCCGG TCCCGGCGGG CCGCGATCAC
ACCAACCTGA TCACCACCTA CCGGCCCGAC GTCGTCATCG ACGCCGCAGG TGTGCACGTC
CGCTCCGAGG CCGCGCACGA GCTGCACGAC GATCTGGCCC TGCTCATGTC GACGTCGGGC
AGCACCGGTT CCCCCAAACT CGTCAGGCTT TCCCGAACCA ACCTGACCGC CAACGCCGGA
TCGATCGCCG AGTACCTGCA GATCCGCGAA ACCGACCGCG CCGCAACCAC CCTGCCGATG
TCGTACTGCT ACGGCCTGTC GGTGGTTCAC AGCCACCTGC TGGTGGGTGC GGCGCTGATC
ATGACCGAGC AATCGGTGGC CGACGACGAC TTCTGGGAGC TGTTCACCCG TCACCGCGGC
ACCACGTTCG CCGGTGTCCC GTACACGTTC GAGCTTCTGG ACCGGATCGG CTTCGCGTCG
ATGCGGCTGC CGCATCTGCG CTATGTCACC CAGGCCGGGG GTCGGATGCC GCCCGAACGG
GTGCGGGAGT ACGCCGCACT GGCCGACCGT TGGGGTTGGC AGTTGTTCGT GATGTACGGG
GCCACCGAGG CCACCGCCCG GATGGCCTAC CTGCCACCGG ATCTCGCACT CACCCGGAGC
AACGCCATCG GGCGCCCGGT GCCCGGCGGA TCGTTCTCCC TCGAACCCCT CGACGAATGG
CCGGAGGTCG GCACCGGCGA ACTGGTGTAC CGGGGCGCCA ACGTGATGAT GGGTTACGCC
GATGAACCGG CAGATCTCGC GCGCGGCGCC ACCCTCGACG CGCTCCGCAC CGGCGACATC
GCCCGTCGGG ACGAGCACGG ACTGTACGAG ATCATCGGCC GCAGAAGCCG ATTCGTCAAG
ATGTACGGAC TGCGGATCGA CCTGCAACAG CTTGAGAACA CGCTGAGCGA GGCGGGGGTG
CGCGCCCTGT GCACCGACAA CGGGGACCGT CTGGCCGTGG TCGCCGGCGC CGGGCACGAC
CCCGACGACG TGCGCCGCAC CGCGGCCGGC GCGGCCGGGG TGCCCGCCGG CGCCGTCGAC
GTCGCGTGCG TGCACGAGCT TCCTACGCTG CCCTCCGGCA AGCCCGACTA CCCGACGGCC
CGGGTGTTGG CTGCCGGTGC GCCGCGCAGG ACGCAGCACG ACGGGGACCT GCGGCGGATG
TTCGCCGACG TCCTGCACCT CAACCCGGCC GAGATCACCG AGGACGCCAG CTTCGTCGAC
CTCGGCGGCA ACTCACTGAC GTACGTGACA CTGTCGGTGC GGCTGGAACG CGCGCTGGGC
CGGTTGCCCG CCGACTGGCC GCGGTTGCCG CTGCGCGAGC TGCAGAACCT GCCCGCGCCG
AGTCGTCGAT GGTGGCAGTT CTGGGGCAGC ACCCTGGAAA CCAGCGTCGC GCTGCGCGCG
GTCGCGATCG TGTTGATCGT CGGGTCACAC GCCGAGCTCT TCGAGCTGTG GGGTGGTGCG
CACATCCTGC TCGGGGTCGC GGGCTACAAC TTCGGCCGGT TCTGCCTGAC CCCGCTGCCG
CGTCCGGTAC GCATCAGGCA TCTGCGCACC ACGATCGCCT GGATCGCGAT CCCCTCGGCG
CTGTGGGTGG CGTTCGCGCT CGTCGTCACC GACGACTACC ACGCGTCGAA CCTGTTGCTG
GCCAACAAGT TCCTCGGACC GCACGACAGC ATGACCGCCG GGCGGCTGTG GTTCGTCGAG
GTCCTGGTGT GGACGTTGAT CGCGTTGGCG GTGCTGTTCT GCATCCCGGC GGTGGACCGG
CTCGAACGCC GCCATCCGTT CGCACTCGCG ATCGGGTTCC TGGCGTTCGG CATGGCGCTG
CGCTACGGCG TCGTCGGCGT CGACGAGGGC CGCGATGCCT GGTTCTCGAT GCTCGCGTTC
TGGTTCTTCG CCGCGGGCTG GGCCGCATCC AAGGCGTCCA CCGTCTGGCA GCGCGCCGCG
GTGACGGCCG TGCTGGTCGT CGGCCTGCAC GGCTATTTCG ACGACACCCT GCGCCAACTC
CTGGTGCTCA CCGGCCTCGC CCTGTTGATC TGGCTGCCCG CGGTGCGCTG CCCGGCGGGT
ATCGCGGTGG TGGCCGGCGT GGTGGCCGAG GCCTCGCTGT ACATCTACCT GACGCACTAC
CAGGTCTATC CGCTGTTCGG CAGCCACGAG CTGGTGGGCG TGGTCGCCGC CGTCGTGGTC
GGCATCACGG TCTCGGCCGC GGTCACGCTG GCGCGGCAAT GGTGGGGTGA CCGCAGCTCA
GCCGGCCGGA TGCGTCGCGG GCTCCCGCTC GGCGACGAGC CCCTCCTGGA CCAGGGTGGC
GGCGAGGACG CCGTCGGACC GGATCAGGCA CGCGGTCACG ACGCCGCGGC CCCGCGCCGC
GGCCGGTGA
|
|---|
| Protein sequence | MSPLVDHLRS HGDRPAVLTA DQPLNYRELA EMVESFAHTL GRRRRLVLLE TRNDVATVVR
HLGALAGRHV VLPVPAGRDH TNLITTYRPD VVIDAAGVHV RSEAAHELHD DLALLMSTSG
STGSPKLVRL SRTNLTANAG SIAEYLQIRE TDRAATTLPM SYCYGLSVVH SHLLVGAALI
MTEQSVADDD FWELFTRHRG TTFAGVPYTF ELLDRIGFAS MRLPHLRYVT QAGGRMPPER
VREYAALADR WGWQLFVMYG ATEATARMAY LPPDLALTRS NAIGRPVPGG SFSLEPLDEW
PEVGTGELVY RGANVMMGYA DEPADLARGA TLDALRTGDI ARRDEHGLYE IIGRRSRFVK
MYGLRIDLQQ LENTLSEAGV RALCTDNGDR LAVVAGAGHD PDDVRRTAAG AAGVPAGAVD
VACVHELPTL PSGKPDYPTA RVLAAGAPRR TQHDGDLRRM FADVLHLNPA EITEDASFVD
LGGNSLTYVT LSVRLERALG RLPADWPRLP LRELQNLPAP SRRWWQFWGS TLETSVALRA
VAIVLIVGSH AELFELWGGA HILLGVAGYN FGRFCLTPLP RPVRIRHLRT TIAWIAIPSA
LWVAFALVVT DDYHASNLLL ANKFLGPHDS MTAGRLWFVE VLVWTLIALA VLFCIPAVDR
LERRHPFALA IGFLAFGMAL RYGVVGVDEG RDAWFSMLAF WFFAAGWAAS KASTVWQRAA
VTAVLVVGLH GYFDDTLRQL LVLTGLALLI WLPAVRCPAG IAVVAGVVAE ASLYIYLTHY
QVYPLFGSHE LVGVVAAVVV GITVSAAVTL ARQWWGDRSS AGRMRRGLPL GDEPLLDQGG
GEDAVGPDQA RGHDAAAPRR GR
|
|---|
| |