Gene Mvan_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2198 
Symbol 
ID4646300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2344456 
End bp2345277 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content73% 
IMG OID639805683 
Productacyl-CoA thioesterase 
Protein accessionYP_953019 
Protein GI120403190 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.164433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.878138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAC TCCTCGGCCT GCTCGACGTC ACCGGGGCCG GGCCGCAGAG TTGGCGGGGC 
CGGGCCGGCG GGCCTGCGGG CAAACGGGCC TACGGCGGGC AACTGGCGGC GCAGAGCCTG
GCGGCGGCCG CCCGCACCGT CGACCCCGCC AAGGCGCCGA CCGCGATGCA CCTGCAGTTC
CTGCGCGGCG GCGAGGCCGG CGACCCGGTC GACTACCGGG TGGAGCAGAT CTACGACGGC
CGCACCGCGG CGTCGCGGCG GGTCGACTCG ACCCAGAACG GAAGGCTTCT GACCACGGCC
ACAGTGTCTT TCGCGGCCGC CCTACCCGGG CCGGAGCACG GTCAGCGTGA TCTCGGTGGT
GCCGATCCGG AGTCGCTTCC ACGGACCGGG CCGGCCGGTC CCGCGCCGTC GATGCCGCTG
CACGAGCTCG ACCTCCGCCT CGTCGACGAC GGACATGGCG AGGAGTTCGT CAGGCGGCTG
TGGTGGCGGG CCACCGTCGA CCTCCCCGAC GATCCGCTGC TGCACACGCT GATCGCCGTC
TACGTCACCG ACGTGTACCT GATCGACCCC GCGCTGCAGG TACATGGACA CTCGATGCGA
TCGCGAACCC ACCGCAGCGG TACCACCGAC TCGTCGGTGT GGTTCCACCG AGAGGTCCGT
GCCGACCAGT GGAACCTGCT CGAATGCCGC TCACCGGCCG CGGCGCGGGG CCGCGGCGTC
GTGACCGCGT GCCTGATCCG GTCCGACGGC GTCCTCGCCG CCACCCTGGT CCAGGAGGGG
CTCGTCGCCG AGCGGGAGCC CGCGACGCAT CCGGCCGGCT GA
 
Protein sequence
MSTLLGLLDV TGAGPQSWRG RAGGPAGKRA YGGQLAAQSL AAAARTVDPA KAPTAMHLQF 
LRGGEAGDPV DYRVEQIYDG RTAASRRVDS TQNGRLLTTA TVSFAAALPG PEHGQRDLGG
ADPESLPRTG PAGPAPSMPL HELDLRLVDD GHGEEFVRRL WWRATVDLPD DPLLHTLIAV
YVTDVYLIDP ALQVHGHSMR SRTHRSGTTD SSVWFHREVR ADQWNLLECR SPAAARGRGV
VTACLIRSDG VLAATLVQEG LVAEREPATH PAG