Gene Mvan_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2196 
Symbol 
ID4646298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2342411 
End bp2343226 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID639805681 
ProductHAD family hydrolase 
Protein accessionYP_953017 
Protein GI120403188 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.467237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGCC GGCTACTTGC CACGGCTGAC AGACTGGACG ACGTGCGTTC CACACCGCAG 
TGCTGGCTGA CCGACATGGA CGGTGTGCTC GTCCGCGAGG AACACGCGCT ACCCGGGGCC
GCAGAGTTCC TGCAGCGCCT CATCGACCGT GAGCGGCCCT TTCTGGTTCT CACCAACAAT
TCGATCTTCA CCCCACGCGA CCTGGCGGCG CGGCTGGCCC GATCCGGTCT TGCCGTCCCC
GAGAACGCGA TCTGGACCTC CGCACTGGCC ACCGCGGGGT TTCTGGCCGA CCAGTTGCCC
GGCGGCTCGG CCTACGTCAT CGGCGAGGCG GGGCTGACCA CGGCGCTGCA CGAAGCCGGC
TACACACTCA CCGACATCGA TCCGGACTTC GTGGTGCTCG GCGAGACCCG CACCTACTCG
TTCGAGGCGA TCACCAAGGC GGTGCGCCTC ATCCTCGGTG GCGCCCGCTT CATCGCGACC
AACCCCGACG TGACCGGCCC GTCGGCCGAG GGTCCGTTGC CCGCGACCGG GTCGGTGGCC
GCGATGATCA CGAAGGCCAC CGGACGCGAG CCGTATTTCG TCGGCAAGCC GAACCCGATG
ATGTTCCGCA GCGCGCTCAA CCGGATCGAG GCCCACTCGG AAAGCACGGT CATGGTGGGG
GACCGGATGG ACACCGACGT GGTGGCCGGT ATCGAGGCCG GGCTGGAGAC CATCCTGGTA
CTGACCGGGT CCACGACGAT CGACGACGTC GAGCGCTACC CGTTCCGGCC GAGCCGCGTG
CTGCCGAGCA TCGCCGAGGC GATCGAGTTG GTGTGA
 
Protein sequence
MTSRLLATAD RLDDVRSTPQ CWLTDMDGVL VREEHALPGA AEFLQRLIDR ERPFLVLTNN 
SIFTPRDLAA RLARSGLAVP ENAIWTSALA TAGFLADQLP GGSAYVIGEA GLTTALHEAG
YTLTDIDPDF VVLGETRTYS FEAITKAVRL ILGGARFIAT NPDVTGPSAE GPLPATGSVA
AMITKATGRE PYFVGKPNPM MFRSALNRIE AHSESTVMVG DRMDTDVVAG IEAGLETILV
LTGSTTIDDV ERYPFRPSRV LPSIAEAIEL V