Gene Mvan_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2012 
Symbol 
ID4645335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2150527 
End bp2151546 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID639805497 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_952835 
Protein GI120403006 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.754296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.410286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCC CTTTCACCTG GAAGGTCACC GGGTGGTTCA TGATCGGGTG GTCGGCGGAA 
TACGAGGTCG GGGAGGTCAA GGCGCTCAAG TACTTCGGCG AGGATCTGGC CGCATACCGC
GACGAATCGG GTCAGCTTCA CGTCCTCGAA GCGCACTGCA AACACCTCGG CGCACACATC
GGCCACGGCG GCACGGTGGT CGGCGACTGC ATCGAGTGCC CGTTCCACGG CTGGCGCTGG
GGCCCGGAGG GAGACAACAC CTACATCCCC TACCGGCCGG ACCGGCCCAA CCGGGGCCTG
CGGCTGAGGT CCTACCCGGT CAGGGAGCAG TACGGCTGCA TCTTCATGTG GTACCAGCCC
CAGGGCAAGG AACCCCAGTG GGAACTGCCC GACATCTTCC ACAAGTTCCC ACAGTTCGAG
ACCGACGCGA ACGCCTACTA CCGGCCGTAT CCGGAGTTCT CCAGCCGTGC GGACGCCATT
CCGGTGCACC CGCAGATCGT GGCCGAGAAC GGGCCCGACA GCTCCCACTT CCGCTACGTC
CACAAGGCCA CCGTGACGCC GGTCTGCCTG CACTGGGAAC ACGTCGACGA GGAGTGGCGG
TTCCTGACCG GATGGCCCGA CGCACGCAGC GACGATCCCG ACAGGATGGC ACTGAAGATC
CACAGCCACT TCTCCGGACT GGGGTTCGCG ATGAGCGCGT TCGAGGGTTC GTCGAACCAC
CGGCTCATCT TCGCCTGCAC ACCGGTCGAC GACGAGGTCT CGGACATGTT CTATTCGATC
TGGTGGCCCA AGCTGCCCGG CGAGACATCC GACGTGCCGC CGCCGGAGGT GATCGAGAAG
GTGGAGCGGC AGTTCCTCAA GACCGTGTGG GAGGACTGCG ACATCTGGCG CTACCAGAAG
TACGTGGAGA ACCCGCCGCT GGCCAAGATC GACGCGAAAC CGTACATGGC CATGCGCAAA
TGGGCGCAGC AGTTCTACGA GGTTCCCGCC AAGGTGCCGG CGCCGGCGAC CACCGCATGA
 
Protein sequence
MKVPFTWKVT GWFMIGWSAE YEVGEVKALK YFGEDLAAYR DESGQLHVLE AHCKHLGAHI 
GHGGTVVGDC IECPFHGWRW GPEGDNTYIP YRPDRPNRGL RLRSYPVREQ YGCIFMWYQP
QGKEPQWELP DIFHKFPQFE TDANAYYRPY PEFSSRADAI PVHPQIVAEN GPDSSHFRYV
HKATVTPVCL HWEHVDEEWR FLTGWPDARS DDPDRMALKI HSHFSGLGFA MSAFEGSSNH
RLIFACTPVD DEVSDMFYSI WWPKLPGETS DVPPPEVIEK VERQFLKTVW EDCDIWRYQK
YVENPPLAKI DAKPYMAMRK WAQQFYEVPA KVPAPATTA