Gene Mvan_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1978 
Symbol 
ID4647897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2112689 
End bp2113357 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID639805465 
ProductGntR family transcriptional regulator 
Protein accessionYP_952803 
Protein GI120402974 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATTC CCGAATTCGC GGCCAGGCCG CAGCTCGCCG AGGATGTGGC GCGCTTCGTG 
CGGCGGCGGA TCTTCGAGGG CACCTACCCC GCCGGGCAGT ACATCCGGCT GGAACAGCTG
GCCGACGAAC TCGGCATCAG CGTCACCCCG GTGCGGGAGG CGCTGTTCGG GCTGCGCGCC
GAAGGGTTGC TGACCCAGCA GCCGCGCCGG GGTTTCGTGG TGCTGCCCAT CACCCGCCGT
GACATCGCCG ACGTCGCCGA CGTGCAGGCC CACATCGGCG GCGTGCTGGC CAGCCGGGCC
GCCGAGCGCA TCACCGATGA GCAGCTGCAG GCGCTCGACC ACGTCCAGGA TCAGCTGGAA
GTCGCCTACC ACGCCGACGA CCACGAGGCT GCGGTGCGGC TCAACCACGA GTTCCACCGT
GGCGTCAACG TCGCGGCAGG CTCGCCCAAG CTCGCCCAGT TGATGGGACA GATCACGAAA
TTCGCGCTGG AGTCGGTGTA TCCGACCGTC GAAGGGTGGC CCGCGCACTC CACGCGCGAC
CATCGTGAAC TTCTCGCGGC GCTCAAGGCG CGCGACAGCG AGGCGGCGCG GGCGGCGATG
TCCGAGCATC TCTGCGCCGC GTCGGGTCCG CTGATCGAAC ACCTCACCCG GCGGGGCGTC
ATCCAATGA
 
Protein sequence
MSIPEFAARP QLAEDVARFV RRRIFEGTYP AGQYIRLEQL ADELGISVTP VREALFGLRA 
EGLLTQQPRR GFVVLPITRR DIADVADVQA HIGGVLASRA AERITDEQLQ ALDHVQDQLE
VAYHADDHEA AVRLNHEFHR GVNVAAGSPK LAQLMGQITK FALESVYPTV EGWPAHSTRD
HRELLAALKA RDSEAARAAM SEHLCAASGP LIEHLTRRGV IQ