| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1967 |
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| Symbol | |
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| ID | 4645814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 2099223 |
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| End bp | 2101076 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639805454 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_952792 |
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| Protein GI | 120402963 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA GCGACACACT CCGCAGTCTC GACCTGGTCA TCACCTCGGT GGCCACCAAG
TTGATGGCTG CCAATGCGGC GACCTCCGTC GAGGTGAGTC AGCGGGTGTT GGCCGAACTC
GTCGACTACC TGGGCGTCGA CGTCAGCTTC CTGCGCTACA ACGACCACAA GATCCGGGCG
TCGCGTCTGG TCGCCGAATG GCCGGTGCGG CCCGGCGTTC CCGACCCCGA TCCGCTCGCC
CTCGTGTACT TCGCCGACGC CGACCCCGTG TTCGCTCAGT CCGAGCACGG CAAGAAGCCG
ATGGTGTTCC GCCCGGAGCC GGCCACGGAC GACTACCAGA AGCGCATCGA GGAAACCCGC
GCCGTGCCCG CGACATCGAT GGCCGCGGCG CCACTGGTGT CCGGCGAACT CACCACCGGT
GTGCTCGGAT TCATCAAGTT CGGCGACAGG GAGTGGACCG CCGAGGAACT CAACGGTCTC
GAAGCGATCG CGTCGTTGTT CGCCCAGGTC CAGGCGCGGG TGCAGGCCGA AGAACAGCTG
CGCTACCTCG CCGAGCACGA CGACCTGACC GGGTTGTACA ACCGTCGCGC CCTGCTCGCC
CATCTCGACG AGCGACTCGC AGAAGGCCGA CCCGGCCCGG TGTCGGCGTT GTTTTTCGAC
CTGGACCGAC TCAAGGCGAT CAACGACTAT CTCGGTCATA CCGCCGGCGA CTGGTTCATC
CGGGTGCTCG CCGAACGCCT CCGGCGGGGC GCCGACTGCC CCAACATAAT CGCCCGCCTC
GGTGGTGACG AGTTCGTCCT CGTCCCCACC GTGCCGATGG ACGGCGCGGC CGCCGAGGCC
CTGGCCCACC GTCTGCAGTC GACGTTGCGC GAACGCGTCT CGATCGACGG CGAGATGCTG
ACGCGCACCG TCAGCATCGG GGTGGCGCAG GGCATACCGG GCCGCGACAC CACGTCAGAC
CTGCTCCGCA GAGCCGATCA GGCCGTGCTG ACCGCCAAAG GCTCCGGCGG CAACGAGGTC
GTCGTCTTCA CCGACGACAT GTCGATGAGG CACGAGTTCA ACAACGACAT CGAACTCCAT
CTGCAGAGCG TGATCGAGAA CGGCGCCCTG CTGCTGCACT ACCTGCCCGA GGTCGACATG
CGCACCGGCG AGATCCTGGC GTGCGAAGCC CTGGTCCGCT GGCAGCATCC CACCCGCGGT
CTGTTGTCTC CCGAATCCTT CATCGGTGTC GCCGAATCCA TAAACCTGGC GGGCGAGTTG
GGCCGCTGGG TGATGCGTTC GGCGTGCGCC GACTTCGCCG GCTGGCGCGC ACGCGGCATC
GGAACGGGCA CGGTGATGCG CATCAACGTG TCACCGGTGC AGCTGGTCAC GGACGGTTTC
GTCGAGTCGG TGGCCGGTAT CGTCGACGAG TTCGACCTCG ACGAGGGGTC CGTGTGCCTG
GAGATCACCG AGAGCGTGGT GGTGCAGGAC ATCGAGACCA CCCGGGTCAC CCTCAAGGGT
CTCAAGGAGG CCGGTGTCCG CATCGCCATC GACGACTTCG GCACCGGATA CAGCGCACTG
TCGCACCTGA AGTCGCTGCC GGTGGACACC CTCAAGATCG ACAAGAGCTT CGTCCGTGAA
CTCGGTTCCG ATCCAGGCGA TCTCGCGATC GTGCGAGCGG TCATCGCGCT CGCCGAAGCG
TTCGGCCTGG AGTTGGTGGC CGAAGGCGTC GAAACCGAGG CCGCCGCAAT GACCTTGCTG
CGCCACGGGT GCCATCGAGC CCAGGGATTC CTGCTGTCGC GCCCGATCGA CGGTGCCGCG
ATGAAAGCCC TGCTTGCCCG AGGCCGGGTC CCGGTCAGCT TCGCGAAGTC CTGA
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| Protein sequence | MSDSDTLRSL DLVITSVATK LMAANAATSV EVSQRVLAEL VDYLGVDVSF LRYNDHKIRA
SRLVAEWPVR PGVPDPDPLA LVYFADADPV FAQSEHGKKP MVFRPEPATD DYQKRIEETR
AVPATSMAAA PLVSGELTTG VLGFIKFGDR EWTAEELNGL EAIASLFAQV QARVQAEEQL
RYLAEHDDLT GLYNRRALLA HLDERLAEGR PGPVSALFFD LDRLKAINDY LGHTAGDWFI
RVLAERLRRG ADCPNIIARL GGDEFVLVPT VPMDGAAAEA LAHRLQSTLR ERVSIDGEML
TRTVSIGVAQ GIPGRDTTSD LLRRADQAVL TAKGSGGNEV VVFTDDMSMR HEFNNDIELH
LQSVIENGAL LLHYLPEVDM RTGEILACEA LVRWQHPTRG LLSPESFIGV AESINLAGEL
GRWVMRSACA DFAGWRARGI GTGTVMRINV SPVQLVTDGF VESVAGIVDE FDLDEGSVCL
EITESVVVQD IETTRVTLKG LKEAGVRIAI DDFGTGYSAL SHLKSLPVDT LKIDKSFVRE
LGSDPGDLAI VRAVIALAEA FGLELVAEGV ETEAAAMTLL RHGCHRAQGF LLSRPIDGAA
MKALLARGRV PVSFAKS
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