Gene Mvan_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1892 
Symbol 
ID4645762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2016658 
End bp2017896 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content67% 
IMG OID639805380 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_952719 
Protein GI120402890 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTCA ACCTGCCCGA ACATCTTCCC GCGTTGCTCG CCGAGATGGA TGCGTTCATC 
GAGGCCGAGA TCAAGCCGCT GGAACGGGAG AACATCCAGT ATTTCGACCA CCGTCGCGAG
CATGCCCGCA CCGACTGGGA CAACGGCGGC GTCCCGCGCC GGGAGTGGGA GGATCTGCTC
GACGAGATGC GCAGGCGCGC CGACGCGGCG GGCTGGCTGC GCTACGGCCT GCCGTCACAG
TTCGGCGGCC GGGACGGCAG CAACATCGAC ATGGCGGTGA TCCGGGAACA CCTGGCCGCC
AAGGGGCTAG GCCTGCACAA CGACCTGCAG GACGAGTCGT CGATCGTGGG CAACTTCCCG
CAGGTGATCA TGATGGACCG GTTCGGCACC GAGGAACAGA AGAAGGAATG GACCGACGCC
CTGATAACCG GTGCGCGGTC GATGGCGTTC GGCCTGACCG AACCCAATCA CGGCTCGGAC
GCCACCTGGC TGGAGACCAC CGCAGTGGCC GTCGGCGACG ACTGGATCAT CAACGGCGCC
AAGCGGTGGA ACACCGGCGT GCACCGCGCG ACGCACGACC TGATCTTCGC GCGCACCTCC
GGTGAGCCGG GCCAGGCGCG CGGTATCACC GCCTTCCTGG TGCCCACCGA TGCGCCCGGG
TTCTCGGTGC CGTACTACTG GTGGACGTTC AACATGCCCA CCGACCATGG TGAGGTGGTG
CTGGAGAACG TGCGGGTGCC GGCCGGGGCG GTGCTCGGCG AAGTCGATCG CGGCCTTGAG
GTCGGGCAAA CCTTCCTGCA CGAGAACAGG ATTCGTCAGG CGGCCAGCAG CCTCGGTGCG
GCGCAGTACT GTATCGACCG TGCGGTCGCC TACGCCAACG ACCGCAAGGT GTTCGGCAAG
CCGCTCGCGG TGAACCAGGC CGTCCAGTGG CCTCTGGTGG AGCTGCAGAC CGAGGCACAG
ATGGTGCGTC TGCTGGTCCG GTACGCCGCA TCCGAACTGG ACCGCAACCA CCACATGGAG
GTGTCCGACA AGGTGTCGAT GGCCAACTAC CGGGCCAACC GCCTCGTGTG TGAGGCCGCC
GACCGTGCCA TGCAGGTGTT CGGCGGCGTC GGCTACAGCA GGCACGAGCC GTTCGAGCAT
ATCTACCGCC ACCACCGCCG CTACCGGATC ACCGAGGGGG CCGAGGAGAT CCAGATCCGG
AGGGTGGCGC AGCGACTGTT CGGATTCGGG CGGCGATGA
 
Protein sequence
MDFNLPEHLP ALLAEMDAFI EAEIKPLERE NIQYFDHRRE HARTDWDNGG VPRREWEDLL 
DEMRRRADAA GWLRYGLPSQ FGGRDGSNID MAVIREHLAA KGLGLHNDLQ DESSIVGNFP
QVIMMDRFGT EEQKKEWTDA LITGARSMAF GLTEPNHGSD ATWLETTAVA VGDDWIINGA
KRWNTGVHRA THDLIFARTS GEPGQARGIT AFLVPTDAPG FSVPYYWWTF NMPTDHGEVV
LENVRVPAGA VLGEVDRGLE VGQTFLHENR IRQAASSLGA AQYCIDRAVA YANDRKVFGK
PLAVNQAVQW PLVELQTEAQ MVRLLVRYAA SELDRNHHME VSDKVSMANY RANRLVCEAA
DRAMQVFGGV GYSRHEPFEH IYRHHRRYRI TEGAEEIQIR RVAQRLFGFG RR