Gene Mvan_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1623 
Symbol 
ID4646368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1724702 
End bp1725130 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content71% 
IMG OID639805118 
Producthypothetical protein 
Protein accessionYP_952458 
Protein GI120402629 
COG category[A] RNA processing and modification 
COG ID[COG5178] U5 snRNP spliceosome subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0634262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCAGA GTCCGGTCGA GCGTGTTCGG CCAACGGCAA GCCGCATCGA CTGCCACAAT 
CACCATGACC TCGGCGGCGA AGGACGCCGC CCGATCAGAG GAGTGGCCTT GCGCAAGAGT
TGGCTCGTCG CGTCCGCGGC GGTGGTCCTG GGGGCGTCGG TCCCCGCGCT GACTCCCGCT
CCCGCGTACG CGGTGTGCGG GTCCATCAGC GGTGTGAACG TCGACGTCAC GGGGTGCGCC
GATCCGTTGT ACGAGCTCAA TGCCGCGCCG CCACCGCCAC CGCCACCGCC ACCGCCGCCA
CCGCCGCCAC CGCCGCCGGT GTACGTTCCG CCGCCACCGC CACCGGTGTA CGTACCGCCG
GTGTACGTGC CGCACGTCAG CGTCTGCGCC GACGTCGGTA GGCGCATCAG TGTGGCCGGT
TGCGTCTAG
 
Protein sequence
MSQSPVERVR PTASRIDCHN HHDLGGEGRR PIRGVALRKS WLVASAAVVL GASVPALTPA 
PAYAVCGSIS GVNVDVTGCA DPLYELNAAP PPPPPPPPPP PPPPPPVYVP PPPPPVYVPP
VYVPHVSVCA DVGRRISVAG CV