| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1515 |
|---|
| Symbol | |
|---|
| ID | 4648373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1602615 |
|---|
| End bp | 1603295 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639805013 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_952353 |
|---|
| Protein GI | 120402524 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.217252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.561085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGCA AAGACGGGGC GCGGCGGGCT GTGCGGATCG CGATCATCGA CGATCACGAC
GTGGTGCACG CCGGGATTCG GGCGTGGTGC GAAGAAGCCG ACCCGCCCAT CGAACTGGTC
GGCAGTTTCC TGCGGCCGTC CGAGTACTTC TCGAAGTACC CGACGGCCAC TGATCAGGTC
GACGTGGTGT TGTTCGATGT GCAGATCGAG GGCAATCGGC CCGACTTCGA CACGCTGTCG
AAGCTCGCGG AACGGGATCA ACCGGTCGTC GTCTACTCGC ACATCACCAC CGACGAGGTG
ATCCTGACGT CCCTGGATCT CGGGGCGATC ACCTACCTGG TGAAGTCGGA GGGCAGACGC
CACCTGATCG AGGCGATCCA CGCCGCTCAC ACCGACACGC CGTACGTCGG TCCGCGCATG
GGCAACGCCA TGCTCAACGA CAGCACCGTG GGGCGCATCA AGCTCACCGA TCGGGAGAAG
CAGGTCCTGG TGGCCTGGTT CCAGACCGAG AGCAAGGACC TGGTCGCCAA ACGGTTGTTC
ATCGCGCCGA GCACCGTGCG CACCCATCTG CAGCGGGCGC GCGCGAAGTA CGCCGGCGTA
GGCCGGCCCG CCCCGACGAA GTCGGCGCTG CTGGCGCGGG CCATCGAGGA CGGGATCCTC
AGCCTCAACG ACCTCTACTG A
|
|---|
| Protein sequence | MSRKDGARRA VRIAIIDDHD VVHAGIRAWC EEADPPIELV GSFLRPSEYF SKYPTATDQV
DVVLFDVQIE GNRPDFDTLS KLAERDQPVV VYSHITTDEV ILTSLDLGAI TYLVKSEGRR
HLIEAIHAAH TDTPYVGPRM GNAMLNDSTV GRIKLTDREK QVLVAWFQTE SKDLVAKRLF
IAPSTVRTHL QRARAKYAGV GRPAPTKSAL LARAIEDGIL SLNDLY
|
|---|
| |