Gene Mvan_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1269 
Symbol 
ID4648610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1364125 
End bp1365780 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content71% 
IMG OID639804769 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_952109 
Protein GI120402280 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.934265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACA CCCATGTCGT CACCAATCAG GTCCCGCCGC TGGAAGACTT CAACCCGGCC 
GCCTCGCCGG TCCTCGCCGA GGCGCTGATC CGCGAGGGCG GGCAGTGGGG CGCCGACGAG
GTCGCCGAGC TCGGCGCGCT GGCCGGCAGC GCCGCCGCGC AGCGCTGGGG CGAGCTCGCC
GACCGCAACC GGCCGGTGCT GCACACCCAC GACCGCACCG GTCACCGCAT CGACGAGGTC
GAATACGACC CCGCCTACCA CCAGCTGATG ACGGTGGCGG TCGGCCACGG TCTGCACGCC
GCGCCGTGGG CCGACGACCG CGACGGCTCC CACGTCGTGC GGGCGGCGAA GACCTCGGTG
TGGACGCCGG AACCCGGTCA CATCTGTCCG ATCTCGATGA CGTACGCCGT GGTGCCGGCG
CTGCGCCACA ACCCGGAACT CGCCGCGGTC TACGAACCCT TGCTGACCAG CCGCGTCTAC
GACCCCGAGC TGGCGGTGCC CAGCGCCAAG CCGGGCATCA CCGCCGGGAT GTCGATGACC
GAGAAGCAGG GCGGCTCCGA CGTCCGCGCC GGCACCACCG AGGCCACCCC CAACGGCGAC
GGCACCTACT CGCTGCGCGG GCACAAGTGG TTCACCTCGG CGCCGATGTG CGACATCTTC
CTGGTCCTCG CCCAGGCGCC GGGTGGCCTG AGTTGCTTCT TCCTGCCGCG GATCCTGCCC
GACGGCTCGC GCAACCGGAT GTTCCTGCAA CGCCTCAAGG ACAAGCTCGG CAACCACGCC
AACGCCTCCA GCGAGGTGGA GTACGACGGA GCGACGGCGT GGCTGGTCGG TGAGGAGGGC
CGCGGCGTGC CGACCATCAT CGAGATGGTC AACCTGACCC GGCTGGACTG CGCGCTGGGC
AGCGCGACGA GCATGCGCAA CGGGCTCATG CGTGCCACCC ACCACGCCCA GCACCGCAAG
GCGTTCGGGG CTTACCTCAT CGATCAGCCG CTGATGCGCA ACGTGCTCGC CGACCTCGCG
GTCGAGGCCG AGGCCGCCAC GATGCTGGCG ATGCGGATGG CCGGCGCCAC AGACCGTGCC
GTGCGTGGCG ACGAGCGCGA AACACTGTTG CGCAGAATCG GATTGGCCGC CGCCAAGTAC
TGGGTGTGCA AGCGGGCCAC CCCGCATGCC GCCGAGGCGA TGGAGTGCCT GGGCGGCAAC
GGCTACGTCG AGGACTCCGG GATGCCGCGG CTCTACCGGG AGGCCCCGCT GATGGGCATC
TGGGAGGGCT CGGGCAACGT GAGTGCGCTG GACACGTTGC GCGCCATGGC AACCCGGCCC
GAGTGCATCG ACGTGCTGTT CGACGAGCTC GCCGCGACCG ACGGTCACGA CGCCCGGCTG
GACGCGCACG TGCAGGGTCT GCGGCCGCAG CTGGGCGACC CCGAGACGAT CCAGTACCGC
GCCCGTCAGG TGGCCGAGGA CATCTCGCTG GCGCTGCAGG GTTCGCTGCT GGTGCGCCAC
GGCCATCCCG CCGTGGCCGA GGCCTTCCTG GCCAGCAGGC TCGGCGGCCA GTGGGGCGGC
GCGTTCGGCA CGTTGCCGAC CGGGCTGGAC CTGGCACCGA TCATCGAGCG TGCCCTGGTC
AAGGCCCCGG ACGCGAGGAG GACAGACAAC AGATGA
 
Protein sequence
MHDTHVVTNQ VPPLEDFNPA ASPVLAEALI REGGQWGADE VAELGALAGS AAAQRWGELA 
DRNRPVLHTH DRTGHRIDEV EYDPAYHQLM TVAVGHGLHA APWADDRDGS HVVRAAKTSV
WTPEPGHICP ISMTYAVVPA LRHNPELAAV YEPLLTSRVY DPELAVPSAK PGITAGMSMT
EKQGGSDVRA GTTEATPNGD GTYSLRGHKW FTSAPMCDIF LVLAQAPGGL SCFFLPRILP
DGSRNRMFLQ RLKDKLGNHA NASSEVEYDG ATAWLVGEEG RGVPTIIEMV NLTRLDCALG
SATSMRNGLM RATHHAQHRK AFGAYLIDQP LMRNVLADLA VEAEAATMLA MRMAGATDRA
VRGDERETLL RRIGLAAAKY WVCKRATPHA AEAMECLGGN GYVEDSGMPR LYREAPLMGI
WEGSGNVSAL DTLRAMATRP ECIDVLFDEL AATDGHDARL DAHVQGLRPQ LGDPETIQYR
ARQVAEDISL ALQGSLLVRH GHPAVAEAFL ASRLGGQWGG AFGTLPTGLD LAPIIERALV
KAPDARRTDN R