Gene Mvan_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1254 
Symbol 
ID4648595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1339012 
End bp1340085 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID639804755 
ProductABC transporter-related protein 
Protein accessionYP_952095 
Protein GI120402266 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0999833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCATTG GCATTCAGAT TGAGGGACTG ACCAAGTCCT TCGGGGCCCA GCGAATCTGG 
GAGGACGTCA CCTTCGACCT TCCCGCAGGT GAGGTCAGCG TTCTGCTCGG CCCGTCCGGT
ACCGGTAAGT CGGTGTTCCT GAAGTCCCTG ATCGGTCTGC TGCGTCCCGA GCGCGGCAAG
ATCATCGTCG ACGGCACCAA CATCATCGAG TGCTCGGCCA AGGAGCTGTA CGAGATCCGC
ACGCTGTTCG GCGTGATGTT CCAGGACGGT GCGCTGTTCG GCTCGATGAG CCTCTACGAC
AACACCGCGT TCCCGCTTCG TGAGCACACG AAGAAGAAGG AAAGCGAGAT CCGTCAGATC
GTCATGGAGA AGCTGGACCT GGTGGGTCTC GGCGGTGACG AATCCAAGTT CCCCGGTGAG
ATCTCCGGCG GTATGCGCAA GCGCGCCGGT CTGGCACGCT CCCTGGTGCT CGACCCGCAG
ATCATCCTCT GCGACGAGCC CGACTCCGGC CTGGACCCCG TCCGTACCGC CTATCTGTCC
CAGTTGCTGA TCGACATCAA CGCGCAGATC GACTGCACGA TCCTGATCGT CACGCACAAC
ATCAACATCG CCCGCACCGT GCCCGACAAC ATGGGCATGC TGTTCCGCAA GAAGCTGGTG
ATGTTCGGGC CCCGCGAGGT GCTGCTGACC AGTGATGAGC CGGTGGTCAA GCAGTTCCTC
AACGGTCGTC GTCTCGGCCC GATCGGCATG TCCGAGGAGA AGGACGAGTC GACGATGGCC
GAGGAACAGG CCATGGCCGA CGCCGGCCAC CACGACGGTG GTGTGGAGGA GATCGAGGGC
GTGCCGCCGC AGATCCAGGC CACCCCCGGG ATGCCGGAGC GGCAGGCGGT GGCCCGCCGT
CAGGCGCGGG TGCGCGAGAT CATGCACACC CTGCCACCGG CCGCGCAGGC TGCCATCCGC
GATGATCTCG AGGGCACGCA CCAGTTCCCC TCGCACCAGT TCGCGGGAGA ACCGGCAGTT
CGCCACGAGG ACGACGCCCC CACCGGACGC ATCCCCGTTT CCGGCGAGCG CTGA
 
Protein sequence
MGIGIQIEGL TKSFGAQRIW EDVTFDLPAG EVSVLLGPSG TGKSVFLKSL IGLLRPERGK 
IIVDGTNIIE CSAKELYEIR TLFGVMFQDG ALFGSMSLYD NTAFPLREHT KKKESEIRQI
VMEKLDLVGL GGDESKFPGE ISGGMRKRAG LARSLVLDPQ IILCDEPDSG LDPVRTAYLS
QLLIDINAQI DCTILIVTHN INIARTVPDN MGMLFRKKLV MFGPREVLLT SDEPVVKQFL
NGRRLGPIGM SEEKDESTMA EEQAMADAGH HDGGVEEIEG VPPQIQATPG MPERQAVARR
QARVREIMHT LPPAAQAAIR DDLEGTHQFP SHQFAGEPAV RHEDDAPTGR IPVSGER