| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1087 |
|---|
| Symbol | |
|---|
| ID | 4648497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 1148047 |
|---|
| End bp | 1148541 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639804587 |
|---|
| Product | DNA mismatch endonuclease vsr |
|---|
| Protein accession | YP_951930 |
|---|
| Protein GI | 120402101 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
|---|
| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.603393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGC GCAGCGGCAG ACCATCTTCC AGCAACCGGG TTGCCCGCGA TACGGAAGCG
GAATCTTGGG CTAGCGACCC AAAGGTGAGA GCGCGGATGC AGCGGCAGAG GACCCGAGAC
ACCGAACCGG AGCTGGCACT CCGACGGCTT CTTCACGCTA GAGGATTGAG ATACCGGGTT
GACGCGCAGC CGCTGCCCAG CCTCAGGAGG CGGGCGGACT TGGTATTTGG CCCTGCCAAG
ATTGCCGTGT TTGTCGACGG TTGCTTCTGG CACGGATGTC CCAAGCACGG ACAACGGATT
ACGCATGCCA ACCCGACATA TTGGACCGAC AAGGTCGCAC GGAACAACAG GCGCGACGTA
GAGACCGACG CGGCACTGAA TGAAGCTGGC TGGCTATCTA TTCGCGTCTG GGAGCACGAT
GATCCCGAGA CCGTGGCTGA AATGGTAGAA GCCGAAGTCA GACGACGAAG GCAAGTCACT
CGTTCAGGTC GCTAG
|
|---|
| Protein sequence | MKRRSGRPSS SNRVARDTEA ESWASDPKVR ARMQRQRTRD TEPELALRRL LHARGLRYRV
DAQPLPSLRR RADLVFGPAK IAVFVDGCFW HGCPKHGQRI THANPTYWTD KVARNNRRDV
ETDAALNEAG WLSIRVWEHD DPETVAEMVE AEVRRRRQVT RSGR
|
|---|
| |