Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0988 |
Symbol | |
ID | 4645772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1016804 |
End bp | 1018390 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639804488 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_951832 |
Protein GI | 120402003 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACT ACGACGCGAT CATCATCGGC GCGGGCCACA ACGGACTGAC GGCTGCGACG GTGCTGCAGC GGGCCGGTCT GCGCACCGTG CTCCTGGAAG CCAACACCTA CGCCGGCGGC ATGGCGGCCA CCGTCGAGCT CATCGACGGG TTCCGCTACG AGATCGCGGG GTCGGTGCAG TTCCCCACCC CTGCCGTGGT GGCCAAGGAA CTCGGCCTGG ACCAGCTACC CACCGTCGAC ACCGAGGTGA TGTCGGTCAA CCTCGGTGAC GACGGCGACG AACCGATGAT CTTCTACCGG GACCCGATGC AGTTCATGAC CCACCTCGCC GAGAAGCACG GCGCGGACGC GGTGGCAGGG ATGGCGGGAT TGCTCGGCTG GAGTCACGGG CCGGCGCAGG CGCTGGGCCG CTTCGATGTC TGCACACCAC CGAAGACGAT CGACGAGATG TACGCGTGCG CCGCCGACGA GGACCAACGC AGAGCGATCC ACGACGTGCT GTTCGGCACG GCGATGGACG CCATCGACCG CTACCTGCCC GACAGGCACC GGCACGCGGT GCTGCGCAGC ATGCTCGCCT TCCTCGCCGT CAACTCGACC TACCGCGGAC CGTATACGCC GGGCAGCGCA ACATGTTTGG CGTTCGCCCT CGCCGTGCCG GATGACTCGA CCGCGATGAT GACGAAACTG CAGGGCGGAA TCGGCGCGCT CTGCGACCAC CTGCTGGACC AGTACCTGCG CTGCGGCGGC GCCATCAGAT ACCGGGCGAA GGTCGACGGG ATCACCGTCG ACGGCGGACG CGTCACCGGC GTGCGGTTGC GGGACGGCTC CCGCATCGAC GCTCCTGCCG TGATCTCCAC GCTGGCACCG GATCTCACAC TGAACACCAT GGTGGGCGCC GAGCACCTGC CCGCCGATCT GACCGCCCGC CTCACCGGGC GCGACCACCG GGCGTCTTTC GTGCAGATCC ACTTCGCGCT GGACGGACTG CCCGAATTCG CGCCTCCCTA CGACTTTCTC AACGAGCCCG GCATGCAGGG ATCCATCGGC ATGTTCAACT CTCCCGAGGA GCAACAGCGA CAGTGGGAGG AGTGCCGGCG GGGCGTCATA CCCGACAACC CGTCCATGGG CATGCAGATA CCGTCGGTGC ACGACCCGGC GATGGCGCCG CCGGGTATGC ACGCCGCCAG CGCTTTCGCC TACGCGTTCC CCGTCGAGAC CCCCCGGGAT CAACACGGCC GCCTCAAGAA CGTGATGGCC GAGAAGGTCA TCGACAAGAT CTGCCGGTAC GCCCCGAACT TCCGCGACGT CCAGATCCGC CACATCACAT TCGCGCCGTA TCACATGGAC ACGATGTTCG CGGCTCCCGC GGGCGACTTC TGCCACGGCC TGCTGCACCC GGATCTGATG GGGCCCAACA GGCCCGGACC CAAGGGCTTT CTGGACATGC CCGTACCGAT CGACGGCCTC TATCTCGGTG GCGCCGGATG TCACGGCGGG CCCGGTATCA CATTTATCCC CGGCTACAAC GCCGCACACC AGGTGCTCGC CGATCGCGTC AGCGCAGCGA GTGCGCGAAC CCGCTGA
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Protein sequence | MSDYDAIIIG AGHNGLTAAT VLQRAGLRTV LLEANTYAGG MAATVELIDG FRYEIAGSVQ FPTPAVVAKE LGLDQLPTVD TEVMSVNLGD DGDEPMIFYR DPMQFMTHLA EKHGADAVAG MAGLLGWSHG PAQALGRFDV CTPPKTIDEM YACAADEDQR RAIHDVLFGT AMDAIDRYLP DRHRHAVLRS MLAFLAVNST YRGPYTPGSA TCLAFALAVP DDSTAMMTKL QGGIGALCDH LLDQYLRCGG AIRYRAKVDG ITVDGGRVTG VRLRDGSRID APAVISTLAP DLTLNTMVGA EHLPADLTAR LTGRDHRASF VQIHFALDGL PEFAPPYDFL NEPGMQGSIG MFNSPEEQQR QWEECRRGVI PDNPSMGMQI PSVHDPAMAP PGMHAASAFA YAFPVETPRD QHGRLKNVMA EKVIDKICRY APNFRDVQIR HITFAPYHMD TMFAAPAGDF CHGLLHPDLM GPNRPGPKGF LDMPVPIDGL YLGGAGCHGG PGITFIPGYN AAHQVLADRV SAASARTR
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