Gene Mvan_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0970 
Symbol 
ID4647949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1000236 
End bp1001798 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content66% 
IMG OID639804470 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_951814 
Protein GI120401985 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC TGCCCGAACC CCGATTTCTC GACGAGCGCA TCGCCCACTG GGCGCAGGTC 
AAACCCGATG ACGAGGCGAT GGACTACCTG GACCGGTCCT GGACCTGGTC GCAGTGGAAC
GACCGGGTCC GCCGGCTGGC GGGTGCGCTG ACCGACCGCG GCGTCAAACG CGGCGACGTC
GTGGCGTTCC TCGACAAGAA CCACCCCGCG TGCGTCGAGC TGACCTTCGC CGCCGCCTCG
CTGGGGGCCG CCAACGCGAT CATCAACTTC CGGCTGGCCG CCGACGAACT GGACTATGTG
CTCAACGACT CGGGCGCCAA GCTGCTCATC GTGGGCGAGG AGTTCAAGCC GTCGATCGAC
AAGATCCGCG ACAGGCTCGA GCACATCGAG CACGTCATCT CCGTCAAACC CGAAGGGGAC
GACGAGTACG AGGCGATGCT GGAGGCCTCC TCACCGGTCG GGCGTTCCGC CGACGTCGAG
CCCGGCGACG TCTGCATCAT CATGTATTCG TCGGGGACCA CCGGCCGCCC GAAGGGCGTC
GAGCTGACGC AGGCCAACAT CATCGCCCAT ACCGTCAACG CCCACGAAGG CTTCGAGTTC
GACGAGGGCG ACAAGAACAT GGTGTCGATG CCGCTGTTCC ATGTCGGCGG ATCGTCCTAC
GTGCAGTTCG GGATTCACGA CGGAGTCCCG AGCGTCATGA CGCGCGACGT CGACGGTATG
ACGCTGGCCG GCGCCATCCT CAAGGGCGCC AACCGCACCT TCCTGGTGCC CGCGGTACTG
GCCAAGGTGC TCGAGGCCGG TGAGGACGCC GTGAAACTGT TCGGCTCGCT CAAGACGTTC
GCCTACGGGG CGTCGCCGAT GCCGCTGCCG TTGCTGCGTC AGGCGTTGCA GGCCTGGCCC
AACACCGACT TCATGCAGGC GTACGGATTG ACCGAGCTGT GCGGGGTGAT CAGCCATCTG
CTGCCGGAGG CGCACCGCGA CCCGGGCCGG GAAGAGCGGC TGTCGAGCGC GGGCACGCTG
GTGCCCAACG CCGAGTTGCG GGTGGTCGAT CCGGACACCC TCGAGGACGT CCCGACCGGG
GAGCAAGGCG AATTGTGGTT CCGCTCACCG CAACTGATGA AGGGCTACCA CAACAAGCCG
GAAGCGACGG CCGAGGCGAT CACCGAGGAC GGGTGGTTCC GCACCGGCGA CGTGGGCCGC
GTCGACGACG GCGGCTACAT CTTCGTCGAG GACCGGCTCA AGGACATGAT CATCTCGGGT
GGGGAGAACA TCTACTCCAT CGAGGTGGAG CGGGTGCTCG CCGAGCACGA GGCCGTCGTC
GAGGTCGCGG TGATCGGCAT CCCCGACGAC AGGTGGGGTG AGGTCGTCAA GGCCGTCGTG
GTGCTCGAAC GGGAAGTCAC GGAGACCGAG CTGATCGCGT TCGCCCGCGA ACGGCTGGCC
GCCTACAAGT GCCCGAAGAC CGTCGACATC ACCGACGAGC TGCCCCGCAA CCCCACCGGT
AAGATTCTGA AAAAGGAACT GCGCAAACCG CATTGGGAGG GTCGCGACCG CGCCAACGTC
TGA
 
Protein sequence
MADLPEPRFL DERIAHWAQV KPDDEAMDYL DRSWTWSQWN DRVRRLAGAL TDRGVKRGDV 
VAFLDKNHPA CVELTFAAAS LGAANAIINF RLAADELDYV LNDSGAKLLI VGEEFKPSID
KIRDRLEHIE HVISVKPEGD DEYEAMLEAS SPVGRSADVE PGDVCIIMYS SGTTGRPKGV
ELTQANIIAH TVNAHEGFEF DEGDKNMVSM PLFHVGGSSY VQFGIHDGVP SVMTRDVDGM
TLAGAILKGA NRTFLVPAVL AKVLEAGEDA VKLFGSLKTF AYGASPMPLP LLRQALQAWP
NTDFMQAYGL TELCGVISHL LPEAHRDPGR EERLSSAGTL VPNAELRVVD PDTLEDVPTG
EQGELWFRSP QLMKGYHNKP EATAEAITED GWFRTGDVGR VDDGGYIFVE DRLKDMIISG
GENIYSIEVE RVLAEHEAVV EVAVIGIPDD RWGEVVKAVV VLEREVTETE LIAFARERLA
AYKCPKTVDI TDELPRNPTG KILKKELRKP HWEGRDRANV