Gene Mvan_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0964 
Symbol 
ID4647943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp995101 
End bp996351 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content69% 
IMG OID639804464 
Producthypothetical protein 
Protein accessionYP_951808 
Protein GI120401979 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA GCGTGGCCGA CGCAGTCGTC GGGGTGGCCC GGTTCGGCTA CCGCCGTCGG 
GCGTGGCTGT CGACCGCGGC GCTGATCATG ACCCTCGTCG TGGCATCGGC CTACCTGTTC
TTCGGTGCGC TGCAGGTGAA TCCGCTCGCG TCGAGTTACC GGGTGACGGT GGAGCTCCCC
GAGTCCGCGG GACTGCTGCC CAACCAGAAC GTGACGATGC GCGGCGTCCC CATCGGGCGG
GTCGAGCGCC TCGACATCAC CCCGGCAGGC GTCAACGCAG TGGTGAGCGT GGACTCGTCA
GCGGCGGTCC CGGTGGCAAG TTCGGTGCGG GTGTCGGGTC TGTCGCCGGC GGGCGAGCAG
TACATCGACT TCGTCGCCGA CAGCGGGGAC GGACCCTATC TCGCCGACGG TGCGGTGGTC
TCCCAGGACA ACACGGTCGT GCCGGTCAGC CTCGCCGACC TGCTGGCCAA CGCCGACGGC
GCGCTCGCCC AGGCAGACCC CGCAAAGCTG GAGCTCATCA AGCGCGAGCT GAGCATGAGC
GAAGCCGGTC CGCAGAAGCT CGCCGACATC ATCGACGGCG GCACCTTCCT TCTCACCACG
CTGGATTCGG TGCTGCCCGA GACGAGCAGC ATGCTGCGTA CCAGCCGTGT GGTGCTGACC
CTGGCCGCCG ACAAGAACGC CGGCATCGAG GTCGCCTCAC AGAACCTGGA CCAGGTCTTC
GACGGCGTCA ACCGGATGCG GCAGGGTTTC CGGACCCTGA CCGAGCAGAC CCCGGAAACC
CTCGCCGAGG TCGACAACCT CTTCGCCGAC AACTCCGAAA CCATGGTCCA GCTGCTCGGC
AGCCTGACGT CCACCTCGCA GCTGCTCTAT CTGAGAGTGC CCGCCCTGAA TGCGTTGTTC
CCCGCCCACC GCACGTCGGT CCTCGACGCG ATCGGCAGCA TCATGCACGA CAACGGGCTG
TGGGCCACCG GCGACATCTA TCCGCGGTAC TCGTGCGATT ACGGCACTCC GCGGCTGCCA
CCGTCGTCGG CCGACTACCC GGAAGCGTTC ATGTACACCT ACTGCCGAGA CGACCATCCC
GGTGTGCTGG TGCGCGGCGC CAAGAACGCA CCGCGGCCCG CCGGCGACGA CACGGCCGGG
CCGCCCGCGG GAGCCGATCT CGGCCGCACC ACGGACCCGA CGCCCAAGGG GCGCTACACG
ATTCCCACCC CCTACGGTGG CCCGACGCTA CCGATAGAGC CGCCCCGATG A
 
Protein sequence
MIGSVADAVV GVARFGYRRR AWLSTAALIM TLVVASAYLF FGALQVNPLA SSYRVTVELP 
ESAGLLPNQN VTMRGVPIGR VERLDITPAG VNAVVSVDSS AAVPVASSVR VSGLSPAGEQ
YIDFVADSGD GPYLADGAVV SQDNTVVPVS LADLLANADG ALAQADPAKL ELIKRELSMS
EAGPQKLADI IDGGTFLLTT LDSVLPETSS MLRTSRVVLT LAADKNAGIE VASQNLDQVF
DGVNRMRQGF RTLTEQTPET LAEVDNLFAD NSETMVQLLG SLTSTSQLLY LRVPALNALF
PAHRTSVLDA IGSIMHDNGL WATGDIYPRY SCDYGTPRLP PSSADYPEAF MYTYCRDDHP
GVLVRGAKNA PRPAGDDTAG PPAGADLGRT TDPTPKGRYT IPTPYGGPTL PIEPPR