| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0796 |
|---|
| Symbol | |
|---|
| ID | 4643493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 833667 |
|---|
| End bp | 834752 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639804296 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_951640 |
|---|
| Protein GI | 120401811 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.121691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGACG GAGCCGTCGG CGACCTGCTG CTGCAGTGGT GGCGTCAGCG AGATGAATAT
CAGTGGCGGA TCGGTTTTTT GCGCAGCCGC GGACTCCTCC CGGTGCTGCG CTGGCTGATC
GCCGGTATCG GCGCGACGAT GGGCGTGCTC TCGGCGGTCA ACGTCGTGCT GCCACCGGGA
GCCGACGACA CCGTGTTCCG CCTCGGCTGG GCGGTCGTCG CCGTGGGCTC GCTGGCCTGG
GCCGCGCGCT GGGCCTTCCT GCCGTGGCCG ACCGCCCGGG AATCGGCCGT CCTGGTCGGG
TGCGTCGACG TCCTCATGAC GCTGTCGGCG CTGCTGTTCG GGGACCCGAA CCTGGCCATG
TCGGGGATCC CCATCTTGCT GTGCGCGGGC GGCTATGTGG TGTTCTTCCA CGGCCCGCGG
CTGCACCTGG CCCACATCGC CTGGTGCACG GTCTCGGTCG TCGGCATCGC GGTGTGGCTG
GCGGCGTCCA CGCCCGACTA CGGCGTTCAG GTGGCGGTCT CCCGGGCCGT GATCGCGCTC
CTGGTCACGG TGTGCATCCT GCCGGCGTTG CAGTTCGGAT TCTGGTTGCT GCAGGGCAGC
TCGAAGCAGT CACTCACCGA CCCGTTGACC GAGCTGACCA ATCGGCGGGG TCTGGCGGTG
TCGATGCAGC GGCTCAACGA GGCCGCGCCC ACCGGAGCCG ACCTGTGTGC GCTGCTGATC
GACGTCGACG GTTTCAAGAG GGTCAACGAC ACGCTGGGGC ACGCGGTCGG CGACGAGGTG
CTGATCCGGA CGGCGCGACG GATCCGGCAG AGCGTGCGTG GGGATGCCGT GGTGGTGCGG
TGGGGCGGTG AGGAATTCCT GGTGGTCGAC CGGATTCCGG CCCAGCAGGC CGGCAAGGTC
GCCGAGCGCA TCCGCGCGGC GGTCTCGGCA CCCGCCCAGC CGCCCGTCAC GGTGAGCATC
GGCCTGGCCA CCTGCACGCG GCCGGATCTT GATCTCATCG ACGTGATCAC CGCGGCCGAC
GCGGCGATGT ACGAAGCCAA GGCGCGCGGC GGCGACCGGG TCGTCGTTAC GGCCGGTGTC
CGCTGA
|
|---|
| Protein sequence | MGDGAVGDLL LQWWRQRDEY QWRIGFLRSR GLLPVLRWLI AGIGATMGVL SAVNVVLPPG
ADDTVFRLGW AVVAVGSLAW AARWAFLPWP TARESAVLVG CVDVLMTLSA LLFGDPNLAM
SGIPILLCAG GYVVFFHGPR LHLAHIAWCT VSVVGIAVWL AASTPDYGVQ VAVSRAVIAL
LVTVCILPAL QFGFWLLQGS SKQSLTDPLT ELTNRRGLAV SMQRLNEAAP TGADLCALLI
DVDGFKRVND TLGHAVGDEV LIRTARRIRQ SVRGDAVVVR WGGEEFLVVD RIPAQQAGKV
AERIRAAVSA PAQPPVTVSI GLATCTRPDL DLIDVITAAD AAMYEAKARG GDRVVVTAGV
R
|
|---|
| |