| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0528 |
|---|
| Symbol | |
|---|
| ID | 4644853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 570290 |
|---|
| End bp | 571543 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639804033 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_951378 |
|---|
| Protein GI | 120401549 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.203103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGCGA ATATGGAGAG TCTGTTCGAC GGTCTGACGA TCCTCGAGCT GGGGCACGTG
ATCGCGGCGC CTTTCGCTGC CTCGCTGATC GGCGACTTCG GAGCACAGGT CATCAAGATC
GAAGACCCCG GCTCGGGGGA CATGTTGCGT AGGTCCGGTC CTCGTAAAGA CGGAGTGCCC
CTCTGGTGGA AGTCCGCGGC CCGGAACAAG TCAAGCGTCG CTGTCGATCT GCGGCTCGCC
GAAGGGCAAG CGCTCGTGCG CAAAATGGTC GAACGCGCAG ACGTGGTGAT CGAAAACTTC
CGCCCGGGAA CGCTTGAGCG CTGGGGACTG GGATGGGAGG AGCTGCACGC AGCGAACCCG
CGGCTGATCA TGTTGCGGAT TTCCGGGTAC GGCCAGATCG GCCCGGAGAG CGCAAAGCCG
GGATATGGAC GCGTCGGCGA GGCCATGAGC GGAGCGGTAC ACATCACCGG GCATCCTGAC
CGGCCACCGA CGCATTTCGG TTTCTCCCTC GGCGATGTCA CGACAGGAAT CATGGGTGCA
TTCGCTGTTG CCGGAGCACT GTTCAAACGC GAAGCGATCG GGGATCGCTT CGATGGGGAA
TGTATCGACC TGGCTCTCTA CGAATCACTG TTCCGTGGTA TCGACTGGCA GGTCATCCTT
TATGACCAGT TGAACTTTGT TGCCGAGCGT CAGGGCAATC AGTTCCAGGT CAGCCCGTCA
CCGGTGTCAG ACACGTATCT CAGTGGCGAT GGGGTGTGGT ACACCGTGGC GACCGGCACC
GTCCGGTCAG TGCAGAGCCT GCTCGAACTG CTGGGCGGCA CGACTCTGCG TAACGATCCG
AAGTACGCGA CTCAGGAACT GCAGATGTTG CACCGCGAGG AGCTCGGCGA GATGGTTCGC
CAGTGGTTCG CCGAAAACAA CTCCGATATC GTCGAAAAGG CCTGCGCGAG CTCCGGTGTC
GTGGCTGCGC GGATCTTCAC GCCGGCAGAG ATGTTCTCCA GTCCCACGTT CGCGGCTCGC
CAGAGCCTGG TCGAGGTCGC CGACCAGGAA TTGGGTCCGG TCCGTGTCAC CGGGGTGGTA
CCAAGGCTGA CGAACTTTCC CGGATCCGTG CGCAGCACTG GGCCCGGTCT CGGGATCCAC
GGCCAAGAGG TGCTGACCGA GTGGCTCGGC ATGGCCGACT CGGAGTACGA GGCGCTGGTA
TCGAGTGGCG TCGTCGGGGC GGTCGACGTT GACGGAGAGG TTCCCGGGCA TTGA
|
|---|
| Protein sequence | MSANMESLFD GLTILELGHV IAAPFAASLI GDFGAQVIKI EDPGSGDMLR RSGPRKDGVP
LWWKSAARNK SSVAVDLRLA EGQALVRKMV ERADVVIENF RPGTLERWGL GWEELHAANP
RLIMLRISGY GQIGPESAKP GYGRVGEAMS GAVHITGHPD RPPTHFGFSL GDVTTGIMGA
FAVAGALFKR EAIGDRFDGE CIDLALYESL FRGIDWQVIL YDQLNFVAER QGNQFQVSPS
PVSDTYLSGD GVWYTVATGT VRSVQSLLEL LGGTTLRNDP KYATQELQML HREELGEMVR
QWFAENNSDI VEKACASSGV VAARIFTPAE MFSSPTFAAR QSLVEVADQE LGPVRVTGVV
PRLTNFPGSV RSTGPGLGIH GQEVLTEWLG MADSEYEALV SSGVVGAVDV DGEVPGH
|
|---|
| |