Gene Mvan_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0222 
Symbol 
ID4647735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp235459 
End bp236445 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID639803731 
Producthypothetical protein 
Protein accessionYP_951077 
Protein GI120401248 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.895984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0567113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTG GTCCCCACTT CGACGACCTG AGGGTCGGAC AGGTCTTCGA CTCCGCTCCG 
TCGATGACGC TGACGGCGGG AGTGGCCGCG ACACATCAGG CGATCATCGG CGACCGGATG
CGCCTGCCCC TCGACGGCGA ACTGTCCCTG TCCGTGGCCG GCGCGACGGC GCCGCTGGCG
CATCCGGCAC TGGTCTGCGA CGTCGCGATC GGCCAGTCGA CGCTGGCCAC CCAGCGGGTC
AAGGCCAACC TGTTCTACCG CGGCCTGACC TTCTACCGCT ATCCCGTCAT CGGTGACTCG
TTGTTCACCC GCACCGAGGT GGTGGGCCTG AGGCAGAACA CCGCCAAGCC CGGCCGGGCG
CCCACCGGGC TTGCCGCACT GCGCATGACG ACGATCGACG GTGTGGGGCG GCTCATCCTG
GATTTCTACC GGTGCGCGAT GCTCCCACTC AGTGATGACA CCGCCCAGAC CGGTCACGAC
GACGATCTCT CCGCGATCGG GGCCGGCGCT GCTCCGGTGG CCGATCCCAC CGCCGACTGG
GATGCCGAGG CGTTCCGGAC GCGGGTGCCG GGACCGCATT TCGACCCGGC GCTGGTGGGC
ACGGTGGGTC GGAGCACCGC GGACGTGGTG AGCAGCGCCC CGGAGTTGGC CAGGCTGTCA
CTGAACATCG CTGCCACACA TCATGATTCA CGTGTCGCGG GTCGCCGGCT GGTCTACGGC
GGGCACACCA TCGGCCTGGC CCTGGCGCAG GCGACCCGGC TGCTGCCCAA CCTCGTGACG
GTGCTGGGCT GGGAGTCCTG CGATCACACC GGGCCGGTGT ACGAGAACGA CACGCTCTAC
AGCGATCTCA CCGTCGAGAG CGCCGACCCG CTCCCGGACG GCCGCGGCGC GGTGCTGCGG
TTGCGCTCGG TCGTCCACGC GGCGGGTGAC GAACCCGGGG CGGACAGGCA GGTTCTGGAG
TGGCGGTTCA GCGCCCTGCA TTTCTGA
 
Protein sequence
MSGGPHFDDL RVGQVFDSAP SMTLTAGVAA THQAIIGDRM RLPLDGELSL SVAGATAPLA 
HPALVCDVAI GQSTLATQRV KANLFYRGLT FYRYPVIGDS LFTRTEVVGL RQNTAKPGRA
PTGLAALRMT TIDGVGRLIL DFYRCAMLPL SDDTAQTGHD DDLSAIGAGA APVADPTADW
DAEAFRTRVP GPHFDPALVG TVGRSTADVV SSAPELARLS LNIAATHHDS RVAGRRLVYG
GHTIGLALAQ ATRLLPNLVT VLGWESCDHT GPVYENDTLY SDLTVESADP LPDGRGAVLR
LRSVVHAAGD EPGADRQVLE WRFSALHF