Gene Mvan_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0188 
Symbol 
ID4647826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp194338 
End bp197244 
Gene Length2907 bp 
Protein Length968 aa 
Translation table11 
GC content69% 
IMG OID639803698 
ProductMmpL11 
Protein accessionYP_951044 
Protein GI120401215 
COG category[R] General function prediction only 
COG ID[COG2409] Predicted drug exporters of the RND superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGCG TGAGCAGCAA CCTGCGCAGG TTCCGCTGGG CGGTTTTCGC GGTCTGGCTC 
CTGCTCCTGG TGCCCTCGAT CTATCTGGCA CTGAACCAGT CCAGCCACCT CACGGGCGGC
GGCTTCGAGG TCGAAGGTTC ACAGTCGCTC TACGTCCAGC GCCAACTCGA GGCGCAGTTC
CCCGACCAGG GCGCCTCCCC GCTCGCCCTG GTCGCCGCGC CGCGCTCGGA TGCGTCGTAC
GACGACATGA CCTCGGCCGT CAGTCACCTC GAGCGTCTGG CCGCCGAGGT GCCCAGCGTC
ACCGTCGTCC CCACCCCGCA ACAGCCCCCG CCGCGGCCCG ACCGCCCGTA CGTCATCACG
CTGCAACTCG ATTTCGAGAA CACCGGTGCC GTCGACGTCG CCAAGCAGCT GCGCGAGAAG
GTCGGTGTCG ACGGCGAAGA ACCCGGCGAG ATGGAGAACG GCAAGGTCCG GCTCTACGTC
ATCGGGCAGG GCGCCCTCGG CGCGGCCGCC ACCCTGGCCA CCAAACACGA CATCGCGCAG
GCCGAGAAGT GGAACTTCCC GATCGTGCTG GTCATCCTGC TTGCGGTGTT CGGCTCGCTG
GCCGCCGCCG CGATGCCGCT GCTACTCGGG GTCTGCACCG TCGTGGTGAC GATGGGGCTG
GTCTTCCTGC TGTCGATGTA CACGACGATG TCGGTGTTCG TCACCTCGAC GGTGTCCATG
TTCGGCATCG CGGTGGCGAT CGACTATTCG CTGTTCATCC TCATGCGGTT CCGCGAGGAA
CTGCGCGCCG GCCGCGAACC CGAGGATGCC GCCGACGCCG CGATGGCGAC GTCAGGGCTG
GCGGTGCTGC TGTCCGGCCT GACGGTGATC GCGTCGGTCA CCGGCATCTA CCTGATCAAC
ACCCCCGTGC TGCAGTCGAT GGCCACCGGC GCGATCCTGG CCGTCGCCGT CGCGGTGCTG
ACGTCGACGA CGCTCACGCC CGCGGTGCTG GCCACCTTCG GCCGCAGGGC GGCGAAACGC
TCGTCGTATC TGCACTGGGG CCGCGGTGTG GAGGCGACGC AGTCGAAGTT CTGGAGCCGC
TGGACCGGCT GGGTGATGCG CAGGCCGTGG GTGTCGGCGA CGGCCGCGGC GGCCGTGCTG
CTGGCGTTCG CCGCCCCCGC GTTCTCGATG ATGCTCGGCA ACAGCATGCA ACGGCAGTTC
GACCCGACCC ACGAGATCCG CGGTGGGGTC AACGCGGCCG CCGAGGCGCT CGGCCCCGGT
GCGCTGGGCC CGATCCGCGT GCTCGTCACC TTCCCGGTGG ACGACGGCGC CGAGGCCGCG
GCGCCGCTGC TCGAATCGTT GCGCCAGAAG ATGGGCCAGG CGCCCAACAC CGTCTCGGTG
TCGCCTCCGG TCTTCGGTAG CGACGGGCGC AGCGCGCTGC TGTCGGCGGT GCTGTCGGTC
GACCCCGAGG ACATGGGGGC CCGTGACACC GTCGACTGGA TGCGCGAGCA GCTGCCGCCG
GTGGCCGGCG ACGCCGCCCG CGTCGACGTG GGCGGCCCGA CCGCGCTGAT CAAGGACTTC
GACGACCGGG TCAGCCAGAC CCAGCCGCTG GTGTTCGTGT TCGTCGCGCT GATCGCGTTC
GTGATGCTGC TGGTCTCGAT CAGGTCGGTG TTCCTGGCGT TCAAGGGCGT GCTGATGACC
GTGCTGTCGG TCGCCGCGGC CTACGGTTCG CTGGTCGTGG TGTTCCAGTG GGGCTGGCTC
GCCGATCTGG GCTTCAAGCA GATCTCGTCG CTGGACAGCA CGATCCCGCC GCTGGTGCTG
GCGCTGACGT TCGGGCTGTC GATGGACTAC GAGATCTTTC TGCTCACCCG GATCCGGGAA
CGGTTCCTGC AGACGGGCAA CACCCGCGAC GCCGTCGCCT ACGGGGTGTC GACCAGCGCC
CGCACCATCA CCAGCGCCGC GCTGATCATG ATCGCGGTGT TCATCGGCTT CGCCTTTGCC
GGTATGCCGC TGGTCGCCCA GCTCGGTGTC GCGTGCGCGG TGGCCATCGC CGTGGACGCC
ACGATCGTGC GGCTGGTGCT GGTGCCCGCG CTGATGGCGA TGTTCGACGA GTGGAACTGG
TGGCTGCCCC GCTGGCTGGA CCGCATCCTC CCGTCGGTCG ACTTCGAGAA GCCGCTGCCC
AAGGCCGACA TCGGCGACCT CGTCATCATC CCCGACGACA TCTCGGCGCT CGCGCCGTCC
GGCTCGGATC TGCGGACCGT GGTGAAGTCC GCGGCCAAGT TGAAGACTCT TGCGCCACAA
GCGATCACAG TTGCCGATCC GCTCGCGTTC AGTGGCTGCC TACCGTGCGG CAAGATCAGC
GGGAACCGCG TCGGCCGCGA CGAGCGGATC ACCGCGGCAG TCACCAACCG GGCCCACGGT
AAAACCGTCG CGGTCAAACT GCCCAAGCAC CCGGTGACGA TGTGGCGCGG CAGGCTCGAC
GTGGCCCTCG ACGCGCTGGC CGTCGAGCAG AGCGCCGGCA ACGGTGAGCC CCGGATCGAG
CGCATCAGCC CGATGGAGAC CACGAACGTG CTGCTGCCCA CCGGCGACCG GCTGCAGATC
CCGACCGGCG CCGAGACGCT GCGGCTGAAG GGCTTCCTGA TCATGTCGCG CAACACCGCG
CGCGACTACC GCGACTTCAC CGAACTGGTC GACTCGATGG ATGTCGACAC CGCGGCGGAC
GTGCTCGCCG GTATGGACCG GTACTACGCT GGGCAACCGG CACGCGCGCA CTGGGTGGCC
ACCCAGCTGG TGCGGCGACT GGCCGAGCCC CTGCCTTCGG ACGGCCCGGA CATCGCGGCG
GCCGGCGCCG ACGAAGAGAC GGAGTGGGCC AAGGTCAGGC AGCGATGCCT GTCGGTGGCG
GTGGCGATGT TGGAGGAGAC GAGGTGA
 
Protein sequence
MLRVSSNLRR FRWAVFAVWL LLLVPSIYLA LNQSSHLTGG GFEVEGSQSL YVQRQLEAQF 
PDQGASPLAL VAAPRSDASY DDMTSAVSHL ERLAAEVPSV TVVPTPQQPP PRPDRPYVIT
LQLDFENTGA VDVAKQLREK VGVDGEEPGE MENGKVRLYV IGQGALGAAA TLATKHDIAQ
AEKWNFPIVL VILLAVFGSL AAAAMPLLLG VCTVVVTMGL VFLLSMYTTM SVFVTSTVSM
FGIAVAIDYS LFILMRFREE LRAGREPEDA ADAAMATSGL AVLLSGLTVI ASVTGIYLIN
TPVLQSMATG AILAVAVAVL TSTTLTPAVL ATFGRRAAKR SSYLHWGRGV EATQSKFWSR
WTGWVMRRPW VSATAAAAVL LAFAAPAFSM MLGNSMQRQF DPTHEIRGGV NAAAEALGPG
ALGPIRVLVT FPVDDGAEAA APLLESLRQK MGQAPNTVSV SPPVFGSDGR SALLSAVLSV
DPEDMGARDT VDWMREQLPP VAGDAARVDV GGPTALIKDF DDRVSQTQPL VFVFVALIAF
VMLLVSIRSV FLAFKGVLMT VLSVAAAYGS LVVVFQWGWL ADLGFKQISS LDSTIPPLVL
ALTFGLSMDY EIFLLTRIRE RFLQTGNTRD AVAYGVSTSA RTITSAALIM IAVFIGFAFA
GMPLVAQLGV ACAVAIAVDA TIVRLVLVPA LMAMFDEWNW WLPRWLDRIL PSVDFEKPLP
KADIGDLVII PDDISALAPS GSDLRTVVKS AAKLKTLAPQ AITVADPLAF SGCLPCGKIS
GNRVGRDERI TAAVTNRAHG KTVAVKLPKH PVTMWRGRLD VALDALAVEQ SAGNGEPRIE
RISPMETTNV LLPTGDRLQI PTGAETLRLK GFLIMSRNTA RDYRDFTELV DSMDVDTAAD
VLAGMDRYYA GQPARAHWVA TQLVRRLAEP LPSDGPDIAA AGADEETEWA KVRQRCLSVA
VAMLEETR