Gene Mthe_1707 details

Gene Information

• Locus tag: Mthe_1707
• Symbol: rpl30p
• ID: 4462667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: -
• Start bp: 1862706
• End bp: 1863161
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 639700726
• Product: 50S ribosomal protein L30P
• Protein accession: YP_844113
• Protein GI: 116754995
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1841] Ribosomal protein L30/L7E
• TIGRFAM ID: [TIGR01309] 50S ribosomal protein L30P, archaeal

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.144024
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGCGA TAATCAGGCT CAGGGGAGAG GTCAACACGA AGCCTGCAAT CAGGGATACC 
CTGAGCATGC TGCGTCTCCA TAGAGTAAAT CACTGCGTAT TCGTGAGAGA GGATGAACAC 
TACCGCGGGA TGATCCAGGT GGTCAAGGAC TACGTCGCCT GGGGAAAAGC AGATGCTGAT 
CTGCTCACCA TGATCCTCGA AAAACGTGGC AGACTCAGCG GGAACAGGCG TCTCACTGAC 
GAGGTTGTGC GCGAGATCTC TCCATACAAG AGCATACGCG AGCTTGCAGA GGCTGTATGC 
GCAGGGGCTG CAAGCCTGAA GGACTTCGGC ATAAAGCCTG TGTTCAGGCT CCACCCTCCG 
AGGAAGGGTC ACCGCGGGAT TAAAAAGACC GTCAAGGAAG GTGGGGAGCT TGGGTATCAC 
GAATCGATTG CCGAGCTCAT AAAGAAGATG AGGTGA 

 

Protein sequence

MYAIIRLRGE VNTKPAIRDT LSMLRLHRVN HCVFVREDEH YRGMIQVVKD YVAWGKADAD 
LLTMILEKRG RLSGNRRLTD EVVREISPYK SIRELAEAVC AGAASLKDFG IKPVFRLHPP 
RKGHRGIKKT VKEGGELGYH ESIAELIKKM R