Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1554 |
Symbol | |
ID | 4461733 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | + |
Start bp | 1687294 |
End bp | 1690259 |
Gene Length | 2966 bp |
Protein Length | |
Translation table | |
GC content | 51% |
IMG OID | 640068829 |
Product | |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03174] CRISPR-associated protein Csc3 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00378338 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCGG ATGCTCTTCA GGATTTGCTC AGAGACCCTG AGAAGCGGTC GTTGTTGAAA AGACGAGGGG AGGTCTCTGA GGATATCAAT TCCAGGGTTC TGGAGAACTA CTTCAGGATT GTGGACATAA ATCTTGTCAG AACTGGTATG TGCTTCAGGC CTGCAAAAAG TGTCGAGTTC GGAAAGACGG ATCAGAGCAT GCTCAACCAC ATCCGGAATG GGGTTTTCTT CCTGCTTCGC TTCAATGATG CCCTCAAGAG GCTCGGTGTG AGAGCACTCG ATGAGGCCGG GCTCAGGGAG TGTATAGCCC TTTTTGTGGT ACATGACCTT CACAAACTGG ACTATGGAGA GATGGATGGG GACAGTCAAA AGAACAGCAT GGAGAATGAG TTCGATATAC CGGAAGATGT AGTCAAAAAG TATGTCGAGG AGATGCACCT CAGCGAGTTC GCTCGTGAGT TGAGGGACGA CGATTACTAC TCTGTGGTTG TGGCACTTCA CAAAAGCAGG TTCTCAAGAC CAGGAGCGAG AACCTCACGG TTCATGGACC TCGAGCCGTT TCTGTACCTC ATGGACACAA TGGCCAGCTG CTCCTCCCCC GAGGAGGCGG CATCTCCCAG AGCCCTCAGG GCCCTGCGTG ACGGCTTTCC TCAGGATGCG GCTGAGAAAC AGCTGAACCT TCAGTATCAC AGGCTTGACG ACGTCAAGGG GATTCTCACA GGTCTTCTGA ACAAATCTAT CGCTGAGGTG CTTGAGGAAA GCGGGCTCGT GATGCTGATG ACGTATCAGG ATGGGTGCGT CTATCTCGGA AAGGGGAATC GGAGAGCGTC CATCTCTGAT GAGCTTGTTG AACGCATATA CCACCGGCTT GAGAAGAACA TACAGGATTC GACTCCGGCG CTCTCTGAGG TTGGATCTAT CGTCAAGAAT GTGGATGTGC AGGGGAACTT GAACTGCTAC CGATTGGATG ATAAATATTA TTTCTTCAGC GGACCGGATA GGGTTTTACG TGCGTATATT GAGAAGGCAA CCGTATCTGC GCGCAGTGTA AAAACCAAGC TATCCAAGCA GATGCTCGAA AACATTGGGA GGGCGCTGAG GGCAGCAGAC ATCGACGTGG AGCTCTCAGA TCAGGATGGC AGGATCGTTG TGGAGTATGC TAGAGCGATC CACGCAGTCC ATAAAATCGT CTCGGAGATC ATCAAGGATA ACACAGAGGC GCTCGCATGG AGCTGCGACG CCTGGGGCGT TACTGAGGAT GTGAAGAGAA GGCTTCTCAG CATCCCATCC GGCGAACTGA CGAGCGGAGG TAAGTGGGAG TATGCTTACG CCATAGCCAG GTGCGTTATG GATGCTGAAA GCGACGGCGT GAAGATCAAA AACATGGAGC CAGCGCGCGC CGCCGATATT CTCTTCGAGA GGATATGGGG TGCCTTAAAA TCCACTGAGG GGTGGGACGC CTTCATCTCA GAAAAGACAA GCACATACAG AGAGGAGATC GCGGCATACA TCCATGAGAC GCTGTCTGTA AACGGAACGA TATCAGTATC GAGCGGATCC GACCTGAGTG ATCCATACAG GGAGTACCAA AGAGGCGGAA GCGGAAGGAT ATGCAACCTC TGCAACAGCG GAACCCTGCT GAGACAGGAT GAGATGAAAT TGCCGATTAC AGTCTCCATG CTGAAATTCA ACTTCAGCAA CAGGATTTTT GCAGGAAAGA CCAAGCCCGA TAACATATAT GCATGCGTCC CATGCGGTGT TGAGCTGGTG CTCAGGCAGA ACGGTTGCGA GATCTCCAGG AGAGCTAATG AGGATATGCT CTACTTACAC ATGATTCCGG ATTACTTCTT CACTCCTGAA TCGTGGGAGA TCGCTCACAG CATTCTGAGC ATGTTCTCCG GGGAGAATGG AGTGCGGATG GCGGCTCTTG CAGATAAGAT CTTCAAATCG AAGTACGTTG GGGGATCATC GGATCTGAAA ACCGATTTTT ATGAGTCGTG GATCGAGGAG CTTGCTTCCC GGGAGAAGAG CAGGAATATG ATGCAGTACA TGGCGCAGAG TTTTGACATG ATCGGAAATC CTTGCATGGT CTTCTACAAA CCCTCTGGGA ACACAACAGA GTTTCATTTC TTCGGCACAT ATCTCGCCCT GATCCTGGCA GCCTACACCG GCATGCGGGT TGTTGTAAGC CACTCGCCCA TAACAACTGT GCGCGGAAGG GATTTTAGGG AGTTCGTGGC CCTTGACTCC GTTGACTCCC ATGTGACGGG TTTTTACAAA AAGATGATAC CACTGTCGCA GATGGAGTTT CGCATCAAGG CCGCAAGCGC TCTCATACGC CTCGGCTATG GCTCGAAGCT GGAGGACTCG CTTTTTCCGA AATATCTTAG GGTATTCAGG GATGAGCCGC TTCCTGGCTC GTATCTTCTC AAGATGGTGT ATCGGGATGC GGATGAGGGC GAGGCGAAGG TCAGAAATCT GATCGATGAG GCGATCTTTC TTGATAAAGT AAAAGGGATG TGATTAATAT GGATGTGTCC GACAGGATCT GTCATCTTGC AGAGCTCGGA TTCGATATCG CACAGCCGAA GGGTTACAAG CCGTACGCGG TCGAACGTCT GTTTCGGGAG GCTGTGAAGG CTGTAACAGA ACTCCAAGGG ATGCCACTCT CCAAGCATGA CTACATGGCA GCTGTTTCCG GAAAGATACA GAAGGCAATC GAGCGCATGG GGGACGATCA GGCGTTCGTG CCTGAGAGGA AGGGCCTCGA CGAAAAGGCG GACAGGTTTG CCCAGCACTT CGTGGAGGAG ATACTTAATG GCATCTGCGA TGGAAGGCCT GGAAGGCTGA AGAAACTGGC GAACAACTTA GCTGACGGAT ACTATTCTGC AACATTGAAT ATACGAAGGA GATACTGGAA AAATAAGAAT GCTGAGGATT TAAAGAATAT GGAGGAATCT GTATGA
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Protein sequence | |
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