Gene Mthe_1321 details

Gene Information

• Locus tag: Mthe_1321
• ID: 4462188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1428435
• End bp: 1429055
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639700340
• Product: DNA-directed RNA polymerase subunit E'
• Protein accession: YP_843739
• Protein GI: 116754621
• COG category: [K] Transcription
• COG ID: [COG1095] DNA-directed RNA polymerase, subunit E'
• TIGRFAM ID: [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAAAA GAATGAAGCT TGAGGGTGTT GTGAGAATAC CCCCTGAGGA TATGGGCAAT 
CCCTTGAACG ACGCGGTGGA GATGGCCCTC CGGAATAAGT ATGAGGCAAG AGTCGACAGG 
ACGCTTGGCG CCATTGTGGC CATCCTCGGC GTTGACAGCA TAGGAGAGGG CCGCATAATA 
GCTGGCGATG GCGCTGTGTA TTACGATGTG ATATTTGATG CGGTGGTCTT CAAGCCGGAG 
ATGCAGGAGG TCGTGGAGGG GGAGGTCGTC GAGATAGTCA AGTTCGGTGC ATTCGTGAGC 
ATAGGACCGT TCGATGGTCT GCTTCACGTG AGCCAGATAA CAGATGAGTA CATGGCATAC 
GATGAGAAGA ACGCCAGGCT TGTGAGCAAG GACACGAACA AGTTCCTGGC GGAGGGTGAT 
AGGGTCCGAG CCAGGATAAT AGCCGTGAGT CTTAATGAGA GAGATCCTAA GGGTAGCAAG 
ATCGGGCTCA CGATGCGTCA GACAGGCCTT GGAAAGATCG AGTGGCTTGA GGCCCTCCGA 
CGTGGTGAAA TCTCAGAGGC AAAGGCAGAG GTGAAGGAGC AGGTGGAGGA GAGGGCCGAG 
CAGAAGGCGG AGGCTGAATG A 

 

Protein sequence

MYKRMKLEGV VRIPPEDMGN PLNDAVEMAL RNKYEARVDR TLGAIVAILG VDSIGEGRII 
AGDGAVYYDV IFDAVVFKPE MQEVVEGEVV EIVKFGAFVS IGPFDGLLHV SQITDEYMAY 
DEKNARLVSK DTNKFLAEGD RVRARIIAVS LNERDPKGSK IGLTMRQTGL GKIEWLEALR 
RGEISEAKAE VKEQVEERAE QKAEAE