Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1250 |
Symbol | |
ID | 4463181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 1346439 |
End bp | 1349768 |
Gene Length | 3330 bp |
Protein Length | 1109 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639700267 |
Product | DNA polymerase II large subunit |
Protein accession | YP_843669 |
Protein GI | 116754551 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGCTG AGTACTTCGA GCGTCTTGAG CGCGGTTTGA GAGAGGAGAT GGAGATCGCT CGGAGGGCGA GATCGAAAGG TCTTGACCCA GAGACAGATG TGGAGATACC CATAGCTGTC GACCTGGCAG AGCGGGTCGA GAAGCTCGTC TCCATACCAG GAGTTGCAGA GAGGATCAGG GAGTTCGAGG TGCAGGGGCT CAGCAGGGAG GAGGCAGCGC TCGCCATCGG CAGGGATTTC GCAGAGGGGC GTCTGGGTAA AGGCGCGAGC AGGCTCGATG CCATCGATAT GGCCATAAGG ACCTCTGTGG CGCTCCTGAC TGAGGGGGTG GTGGCAGCAC CGATCGAGGG CATAGCCAGG GTCGGTTTGG GAAAGAACGA CGACGGTAGC GAGTATCTGA AGGTGTACTA CGCAGGCCCG ATAAGGTCAG CAGGCGGAAC CGCCCAGGCG CTCTCAGTGC TTGTCGCGGA TTACGTCAGG CGGAGCATGG GCATCGCTCC CTACAAACCC ACAGATGAGG AGATAGAGAG GTACGTCGAG GAGATCGGGC TATACAAGCG CCTCCAGCAC CTCCAGTACA CACCATCTGA TGATGAGATA AGAACGATAA TCAGAAACTG TCCTGTGTGC ATAGATGGCG AGCCCACAGA GGAGGAGGAG GTCTCCGGCT ACCGTGATCT TCCCAGAGTT GAGACGAACA GGGTTCGCGG GGGCATCGCG CTCGTCTCCG CAGAGGGCAT CGCGCTGAAG CGCCCGAAGA TAAAGAAGCA TGTCTCAAAG CTCGGAATAG ATGGCTGGGG GTGGCTGGAC GTGCTTGGCG GGGAGAAGAA GGATGGTGGG GGATCGAGCG GGAAGTTTCT AAGGGATCTG ATAGCGGGCA GGCCGGTCTT CTCCCATCCA TCCAGGCCCG GAGGATTCAG GCTTCGTTAC GGGAGATCCA GAAACACAGG TCTCGCAGCA GCCGGCATAA ATCCGGCCAC GATGATGGTG CTCAACCAGT TCCTTGCCCC CGGAACCCAG ATCAAGGTCG AGCAGCCAGG CAAGGCTGCC GCCGTAGCTC CGGTGAGCTC CATCGAGGGT CCCACTGTAC GGCTGACGAA TGGCGATGTT GTGCGCATAG ACGATCCGTC ATCGTTTCCG TGGATATCAA GCCCTGAGGC TCTGAGGAGG AATATCTCAA AGATCATAGA CCTCGGCGAG ATCCTGGTCA GCTTCGGTGA TTTCATGGAG AACAACAGGC CGCTTGCGCC CGCATCCTAC ACCTTCGAGT GGTGGGCTGA GGAGTTCAGG AGGGCTGGCG GCGATCCGGC GGGAATGGAG CATGTAGATG GAAGAACGGC GATACGGCTC TCGAGAGATT TCGGCGTGCC GCTTCATCCC GATCACACAT ATCTCTGGCA CGATATAACC CTGGATGAGC TGGATCTGCT TGCGGATGCA GCCTCTGATG GGGAAATCGA CGGTGATGCG CTTCTCATGG ATATGCGCGA GGATGTGAAG GAGGTCCTAG AGAAGCTGCT TGTCCATCAC AAAGTCAGAG ATGGAATGAT CGTGGTGGAG GACGCACTCC CGCTCCTACT TTGCCTGGGC GTGGATGAGA CCGGAAGGCG CTGGAGAAGA GAGGATCTTA ATGCGGATAA TGCGCTGAGT GCCGTCAACC AGCTCTCTGG ACTCGTAATA AGGGCGAGAG CGCCCACCAG GATCGGATGC AGGATGGGAC GGCCGGAGAA ATCGGACAGG AGGGAGATGC GCCCTCCGCC GCACGTCCTC TTCCCCACGG GCTCTGAAGG AGGAAAGAGC CGTCTTGTGA ATGAGGCCGC AGAGCATGGA TTCATAGAGG TTGTTGTGGA AAGAAGGAGA TGCCCGTCCT GCGGTAAGGA GGGGTTTGCG TTCAGATGCG AGTGTGGAGC CCATACAGAG CGTGTGCGTG CATGTCTGTC ATGCGGGGTG CGTGCCGACG ATAAATGCCC CAGGTGCGGC ACAGAGACGA GCGCAGCCAC GCGGATGAGG ATAGATGTGA AAGGCACTCT CGCAAGAGCT CTTGAATCCC TTGGGGAACG TGTTGATAAC ATCAGGGGCG TCATGGGGCT GACGTCAAGG GACTCCACGC CGGAGCCGCT CGAGAAGGGG GTGTTGAGGG CAAAGCACGG CGTGTTTATC TTCAAGGACG GGACATCAAG GTATGATCTA ACAGATCTTC CTCTCACGCA CTTCCGGCCC AGAGAGATCG GCACCAGCGT GGATGCTCTT CTCGATCTCG GGTACACGCA CGACATCCAT GGAAAACCTC TGGAGAGCGA TGATCAGATC CTGGAGCTGA AGGTCCAGGA CGTCGTGCTC TGCAGAAATG CTGGCGACTG GCTTCTCAGG GTCTCGAAGT TTATAGATGA TCTCCTCGTT AAATTCTATG GTCTTGAGCC ATACTACAAT GCGGAGAGAC CTGAGGATCT CATAGGTAGA CTGATGATCG GGCTGGCCCC GCACACATCC GCTGGAGTTC TCTGCAGGCT CATAGGGTTC ACGAGGGCGA GTGCTGGATA CGCACATCCC TATTTCCACG CAGCCAAGAG GAGAAACTGT GATGGCGATG AGGACTGCGT GATGCTGCTG ATGGACGCGC TGCTGAACTT CTCCAGATCC TACCTGCCGG AGAAGAGGGG TGGGAAGATG GACGCGCCTC TCGTCCTGAC AACAAGAATT AACCCCGCAG AGGTCGACAA GGAGGCCCAC AACCTCGATC TATCTTTCAT TTACCCTCTT GAGTTCTATG AGGCGACTTT GAGGAATGCA AACCCGAAGG ATGTTGAGGG GTTGATAGAT CTCGTCTCAA AGCGGCTTGG AAGCGAAGGG CAGTACTGTG GCTTCGGCTT CACCCACGAT ACAGATGATA TCGCAGGTGG TCCGAGAAAC AGCTCCTACA AGACCCTTGA GACGATGATA GACAAAATGA AATCCCAGCT GGAGCTCGCC AAACTGATTA GAGCTGTTGA TGCGACTGAT GTGGCTGAGC GTGTGATAAA CTCTCATTTC CTGCCGGATC TGATGGGAAA CCTACGGGCG TTCTCGCGCC AGAGTGTGCG CTGCGTGAAA TGCAACGCGA AGTACAGGAG GCCTCCGCTC AGCGAGAGCT GCCCGAAGTG TGGTGGGAGG CTTGTGCTCA CAGTCCATGA GGGCAGCGTC AGAAAATACC TCGAGGTCTC GATGAAGGTC GCGGAGGAGT ACGGCGTGTC GAGCTATACG CGCCAGCGGC TCGAGCTGAT CCAAATGGAG ATAGAATCGC TATTCAGATC GGATAAGGTG AAGCAGACTG GCCTCGCGGA TTTTGTGTGA
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Protein sequence | MSAEYFERLE RGLREEMEIA RRARSKGLDP ETDVEIPIAV DLAERVEKLV SIPGVAERIR EFEVQGLSRE EAALAIGRDF AEGRLGKGAS RLDAIDMAIR TSVALLTEGV VAAPIEGIAR VGLGKNDDGS EYLKVYYAGP IRSAGGTAQA LSVLVADYVR RSMGIAPYKP TDEEIERYVE EIGLYKRLQH LQYTPSDDEI RTIIRNCPVC IDGEPTEEEE VSGYRDLPRV ETNRVRGGIA LVSAEGIALK RPKIKKHVSK LGIDGWGWLD VLGGEKKDGG GSSGKFLRDL IAGRPVFSHP SRPGGFRLRY GRSRNTGLAA AGINPATMMV LNQFLAPGTQ IKVEQPGKAA AVAPVSSIEG PTVRLTNGDV VRIDDPSSFP WISSPEALRR NISKIIDLGE ILVSFGDFME NNRPLAPASY TFEWWAEEFR RAGGDPAGME HVDGRTAIRL SRDFGVPLHP DHTYLWHDIT LDELDLLADA ASDGEIDGDA LLMDMREDVK EVLEKLLVHH KVRDGMIVVE DALPLLLCLG VDETGRRWRR EDLNADNALS AVNQLSGLVI RARAPTRIGC RMGRPEKSDR REMRPPPHVL FPTGSEGGKS RLVNEAAEHG FIEVVVERRR CPSCGKEGFA FRCECGAHTE RVRACLSCGV RADDKCPRCG TETSAATRMR IDVKGTLARA LESLGERVDN IRGVMGLTSR DSTPEPLEKG VLRAKHGVFI FKDGTSRYDL TDLPLTHFRP REIGTSVDAL LDLGYTHDIH GKPLESDDQI LELKVQDVVL CRNAGDWLLR VSKFIDDLLV KFYGLEPYYN AERPEDLIGR LMIGLAPHTS AGVLCRLIGF TRASAGYAHP YFHAAKRRNC DGDEDCVMLL MDALLNFSRS YLPEKRGGKM DAPLVLTTRI NPAEVDKEAH NLDLSFIYPL EFYEATLRNA NPKDVEGLID LVSKRLGSEG QYCGFGFTHD TDDIAGGPRN SSYKTLETMI DKMKSQLELA KLIRAVDATD VAERVINSHF LPDLMGNLRA FSRQSVRCVK CNAKYRRPPL SESCPKCGGR LVLTVHEGSV RKYLEVSMKV AEEYGVSSYT RQRLELIQME IESLFRSDKV KQTGLADFV
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