Gene Mthe_0547 details

Gene Information

• Locus tag: Mthe_0547
• ID: 4463007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: -
• Start bp: 567539
• End bp: 569503
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639699553
• Product: hypothetical protein
• Protein accession: YP_842978
• Protein GI: 116753860
• COG category: [S] Function unknown
• COG ID: [COG2433] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0419873
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAATA GGATATTCGG TGTGGATATC GCCAGCGGCT CCCCAAGGAG CAGGAGTCAG 
CCGAGCTATG CGCTGTTTGT GATAGAGGGG GAGAGCAGCT ACTGCTATGA GATGGTCAGC 
AGGCAGAAGC TCATCCGATT TATAAGAGAG AAGAAGCCGG ATATCATAGC GGTGGATAAC 
ATCTTTGAGC TCGCTTCAGA CAGGAACGAG CTCACAGCCC TCATGAGGCT GTTCCCGCCA 
GGCACAAGAA TCGTCCAGGT GACTGGCGGG GATCATCCGG AGCCGCTTGT GAAGGTGGCG 
AGGTGGCATG GCATAGCTTT TGATCGATTG AATCCCATGC ATGAGGCTGA GGCATGTGCA 
CGCCTTGCCG CAAAGGGCAT CGGGTGCGCA GTCTCCGTTT TCGAGAACAG GACTTGGATA 
AAGGTGAGCC GGAGGCGCTC TCCCGGAAGG GGTGGGTGGA GCCAGAACAG GTACTCCAGG 
AAGATCCACG GAAACGTGAA GCTCATCTCC AGGGATATCG AACAGCGTCT CAAAGAGAGC 
GGTCTCGAGT TTACGATGAA GGCTGTGGAG GGGCTTGGCG GTTATATCAG ATGCGAGTTC 
ATGGTCGAGG CGCCCAGGGA GAGGGTACCG GTGCATTCCA GCTCGAGGGG GGACGTCCAG 
ATACGGGTTG CACCAATCCC GCGGCAGCGT TTACAGTTTG TTCCCCTGCA GCAGCGCAGG 
GACTATCTAA TTGTTGGCAT GGATCCCGGG ACCACAACTG GGATTGCAGC CCTCAATCTC 
AGGGGAGAGC TCGTCGATCT CATCTCTGCC AGAACTATGT CCTCCTCGGA TGTTATCGAG 
TGGATAGCAG CCCGTGGGAG GCCTCTGATA GTGGCTACGG ATGTTTCTCC AGCCCCTGGG 
GCCGTGGAGA AGATAAAGCG GGCATTCAAC GCGGTCCTTT ACTCCCCAGG TGAAGATCTG 
GCAGCCGAGG ATAAGATCAT GCTTGCCAGG CCCTTCGACT ACAGGAACGA TCACGAGAGG 
GATGCGCTTG CAGCAGCGAT GAGCGCATTC AAAAAATACA GAAACAAGTT CAGCCAGGTG 
GAGAAGAAGG TCTCGCGGGA TGTGAATCCG GACGAGGTGA AGGCGCTTGT GGTGAGGGGT 
TACTCCATCG AGAAGGCGAT GGCTGAGCTT CTGGAGTCGG ATGAGATGCC TGTGGCGTCA 
GCTGAAGAGC CTCCGCAGAT CCCACCGCCG AGGCCTGAGG AGCTGAGGCT TCTGACAGAG 
CAGGTCAGAA ACCTCAGGGA GTATGTGGAG GATCTCAGGG CTGAGATCTC CTCAAAAGAT 
AAAGAGATCT CGGAGTTGAA GGGACAGCTG GAGAAGCTGC AGGACAGAGC ATACAGAGAG 
ATGAAACGCG ACCACGAGAT CCGGATAAGG GACAAGGAGA TAGAACGGCT CAGAAACCTG 
CTGAGAGCTG AGAGGAAACG CATGCGGAGA CTCAGATCAG AGGCGAAGAG GATCCGGAAG 
GCGGAGCGGA TAGAGGCGAT GGCAGGATAC AGGAAGTTGA AGCCAGTTCC AGTCTTCTCA 
AAGGAGGCGA TCCTCTCCGC GAGAAGCAAG TGGTCCATAG GACGGGGAGA TCTCATACTG 
CTCCAGGATC CCTCGGGCGG CGGCCCGAAC ACAGCAGATC TCATCGCAGA TCTTGAGGTT 
GAGGCTGTGG TCGTCTTGAA GGAGATGCCT CAGAGGATGA TGGAGTACTT CATGGAGAAG 
TCCCTTCCTG TGCTCAGCGC AGACGAACTC TCAATAAAGA CGATAGATGG GATATCATTC 
GTTGATCCTG AGATGCTGAA AGCCGCGAAG GAGAGATGGG CGGAGCAGAG AAGGGCGTAT 
GAGGCGGAGA AGAGGGCTGA GCGGCTCAGA AGCATCATTG AGGAGTACAG GGCTGAGCGG 
CTCAGGGAGG AGAGGCTCGA GGCCAAGCGG CGATCAATGT TGTGA 

 

Protein sequence

MENRIFGVDI ASGSPRSRSQ PSYALFVIEG ESSYCYEMVS RQKLIRFIRE KKPDIIAVDN 
IFELASDRNE LTALMRLFPP GTRIVQVTGG DHPEPLVKVA RWHGIAFDRL NPMHEAEACA 
RLAAKGIGCA VSVFENRTWI KVSRRRSPGR GGWSQNRYSR KIHGNVKLIS RDIEQRLKES 
GLEFTMKAVE GLGGYIRCEF MVEAPRERVP VHSSSRGDVQ IRVAPIPRQR LQFVPLQQRR 
DYLIVGMDPG TTTGIAALNL RGELVDLISA RTMSSSDVIE WIAARGRPLI VATDVSPAPG 
AVEKIKRAFN AVLYSPGEDL AAEDKIMLAR PFDYRNDHER DALAAAMSAF KKYRNKFSQV 
EKKVSRDVNP DEVKALVVRG YSIEKAMAEL LESDEMPVAS AEEPPQIPPP RPEELRLLTE 
QVRNLREYVE DLRAEISSKD KEISELKGQL EKLQDRAYRE MKRDHEIRIR DKEIERLRNL 
LRAERKRMRR LRSEAKRIRK AERIEAMAGY RKLKPVPVFS KEAILSARSK WSIGRGDLIL 
LQDPSGGGPN TADLIADLEV EAVVVLKEMP QRMMEYFMEK SLPVLSADEL SIKTIDGISF 
VDPEMLKAAK ERWAEQRRAY EAEKRAERLR SIIEEYRAER LREERLEAKR RSML