| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0534 |
|---|
| Symbol | |
|---|
| ID | 4462726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 554705 |
|---|
| End bp | 555412 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639699540 |
|---|
| Product | phosphoesterase, putative |
|---|
| Protein accession | YP_842965 |
|---|
| Protein GI | 116753847 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1407] Predicted ICC-like phosphoesterases |
|---|
| TIGRFAM ID | [TIGR00024] putative phosphoesterase, SbcD/Mre11-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.988231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCATCG AGGATCTTCG AGATCATCTA ATGAAGAGGT TCGATTTCCT TCTGGGATCT
CTCTATATTA AGGAGACGGA AACATGTGTG CTCTCCGATA TCCACATTGG CCTCGAGGAG
GAGCTCCTCG CCCAGGGGCT CGTCTTCCCT CTCAGGGAAA AAGAGGAGCT GCTGCGGAGA
ATCGAGATCA TCCTTGCGAA GCTTAATCCG AAAAGGTTCG TTCTTGCAGG AGATGTGGTC
CATTCATTCG GACGGGCGGA TCAGAGGATT CGGAGGAAGC TTGATGCCAT CTTAAACACA
ATCCGCTCGC GATGCGATCT GGTTCTCATT TCAGGCACAC ACGATGGGAT GCTGCCCTAC
ATGGGATTCA CAGCTCAGAG CAGATATGAT GAGGGTGGGT ACACAGTATC TCACGGGGAC
GAGGACCTTA GGGACCACGG CCATCTGATA ATGGGACACG AGCATCCGGT GCTGGATGTC
GAGATGATGC GCATACCATG CTACCTCTTT GGCAGGGGTC CCATGGACGG AATGGACATC
ATGGTCCTGC CTGCCTTCAA TCCGCTCTGC CAGGGCGTGG CTGTGAACCA TCTCGAAGCT
CCTGATCTTT TGTCGCCTCT GCTGAGAAGA CTGGACATAG GCAAGCTTCA TCCTGTTGTC
GAGATGGAGG GGGAGGTGAT GGTCTTCCCG GAGATCAGGC ATCTGTAA
|
|---|
| Protein sequence | MIIEDLRDHL MKRFDFLLGS LYIKETETCV LSDIHIGLEE ELLAQGLVFP LREKEELLRR
IEIILAKLNP KRFVLAGDVV HSFGRADQRI RRKLDAILNT IRSRCDLVLI SGTHDGMLPY
MGFTAQSRYD EGGYTVSHGD EDLRDHGHLI MGHEHPVLDV EMMRIPCYLF GRGPMDGMDI
MVLPAFNPLC QGVAVNHLEA PDLLSPLLRR LDIGKLHPVV EMEGEVMVFP EIRHL
|
|---|
| |