Gene Mthe_0322 details

Gene Information

• Locus tag: Mthe_0322
• ID: 4463300
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 321801
• End bp: 323747
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639699327
• Product: periplasmic copper-binding
• Protein accession: YP_842757
• Protein GI: 116753639
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3420] Nitrous oxidase accessory protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACATGC GATACGCTCT TTGTCTTCTG ATGCTCATTC AGATCTCGCT GGCAGACGCG 
GGGACGATCG TGGTAACGCC CGGCGGCAGC ATCCAGGCGG CGATAGACTC GGCTTCATCT 
GGCGATGCCA TAGAGATTCA GGGTGGCATC TACTCAGAGA GAATCGTGGT CGATAAGAGT 
TTGATCATAA GGGGCAATAC GACATCCGGC TACCCTGTGG TGAACGCAGG AGGATCAGGA 
ACCGCTGTTA CGATCTCTGG AGATGATATA CAGATCACAG GAATCAGGGC GATTGGCTCG 
GGAATGGCCC CAAGAGATGC TGGTATTTTC GTAACGGGAA GGAACAACCG CGTGATGGAC 
TGCCAGGTCT CAGGCAACAG ATACGGGATC GTGCTCTCCT TCGCAGAGGG CTGTACGCTT 
GAGAACATAC TGGCTGAGGC CAGCAGCGAG GCAGGCATGC TCCTCGACAA CTCCACGAAA 
AACAGCATCA TCGGATGCAA ACTTGAAAAC AACATCCACG GTATCAGGCT GGTATCATCG 
GAGTCAAACA CGATACGTGG AAATATCATA TCGAATACCA CATTCGAAGC TCTCTCTCTA 
GAGAGATCTA GCAACAGGAA TCTCATCGAG GACAACATCA TCAGGTTCAA CCAGATAGGC 
ATCTCCCTGG AGACCTCACG GGGCAACAAT ATAACCAGGA ATCTCGCGAG CAACAACAGT 
GTGGGGATAA AAATAGCAAA CCACAACGAC ACCGAGTCGA TCAGCCCCAT CGAGAACCCG 
GGCAAGTACG GCGGAGTCTC GATAAAGTAC AAGCCTAACA GCGATATCAA GAGCTACGAC 
GTCAGGGACA AGGATCTGAG CTCGTACACG ACAAACACGA TCTACAACAA CACCCTGATC 
AATAACGAAG AGAACGCCAT CGATGATGGA AACAATCAGT GGGATAACGG CACACTCGGA 
AACCATTACA GCGATTTCGA TGAGCCTGAG GAGGGATGCA GGGACAGAAA CCGCGACGGC 
ATCTGCGATT CAGCCCACGA GATCGAGGGC GGGATGTCCA CCGACAGGCA CCCACTCTCG 
CCGAAGGATC CGATGAAGGC GAGGTTCATG TCCAAGAAGA ATGGCGCATA CCTCGGCCTG 
GACAGGATGG TCTTCATGCC AGGGGAGAGG ATCGATATGA GGCTGTCCGT TCCAGAGAAC 
ATCACCGCGT GGATAGGGGT ACTGCCTGCA GGCGAGCCAC ACGGCGCTCT CGACAGGACA 
AAGGCGATAT CGTACACCAC TGTAAACAGC AGCATCAGGG AGGTTGCGCT CGAGGCACCG 
AGGATGGTGG GATCATATGA GATACGGATG TACTCAACCG AGGAGATGGT GTATCTCCCG 
ATAAGCGTGG AGGTACCCGA GATCCATATC TCTCCTGCTG AGGTCAAGGC GTGTGAGCCG 
ATCAACGTGA CGTACTCAGG GGCTCCGGGC TACGAGGGTG ACTGGATAGG GATGTTCTCC 
ACAGGCGCGG GAGATCGCTC GCCGCTCTCC AGAAAATATC TCGACGGGAG CACGAACGGC 
TCGCTTGTGC TGTACACACC AAGCACACCG GGAACATATA ACGTGCGGAT GTTCGCGGAC 
GATGGATACA GGCTGCTTGC GGTCAGCGAG CCGGTCACGG TGAAGCAGAA TGCCGGCGTG 
AGGATAGTCG CGGAGCCTGA GACCGTCTCG CCAGGCCAGG CGATATATGT TCACTTCTGG 
GGCGCGATGC CGGACAGCGT CATAGGCATG TACGGGGTGA CGAGACCTGA TAAGTTCTGG 
ATAAGCATGC AGCCGACTGG CGGGCCGTCA TGCGGCACCC TGACGTTCAG GGCTCCATAC 
GGCGGGGGCA ACTACGACTT CAGGCTCTTT GAGAACAACG TCTACAGAAA GCACATGGGC 
GCCAGCAACG TCGTGCGGGT TGTGTAG 

 

Protein sequence

MHMRYALCLL MLIQISLADA GTIVVTPGGS IQAAIDSASS GDAIEIQGGI YSERIVVDKS 
LIIRGNTTSG YPVVNAGGSG TAVTISGDDI QITGIRAIGS GMAPRDAGIF VTGRNNRVMD 
CQVSGNRYGI VLSFAEGCTL ENILAEASSE AGMLLDNSTK NSIIGCKLEN NIHGIRLVSS 
ESNTIRGNII SNTTFEALSL ERSSNRNLIE DNIIRFNQIG ISLETSRGNN ITRNLASNNS 
VGIKIANHND TESISPIENP GKYGGVSIKY KPNSDIKSYD VRDKDLSSYT TNTIYNNTLI 
NNEENAIDDG NNQWDNGTLG NHYSDFDEPE EGCRDRNRDG ICDSAHEIEG GMSTDRHPLS 
PKDPMKARFM SKKNGAYLGL DRMVFMPGER IDMRLSVPEN ITAWIGVLPA GEPHGALDRT 
KAISYTTVNS SIREVALEAP RMVGSYEIRM YSTEEMVYLP ISVEVPEIHI SPAEVKACEP 
INVTYSGAPG YEGDWIGMFS TGAGDRSPLS RKYLDGSTNG SLVLYTPSTP GTYNVRMFAD 
DGYRLLAVSE PVTVKQNAGV RIVAEPETVS PGQAIYVHFW GAMPDSVIGM YGVTRPDKFW 
ISMQPTGGPS CGTLTFRAPY GGGNYDFRLF ENNVYRKHMG ASNVVRVV