Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0317 |
Symbol | |
ID | 4463295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 317030 |
End bp | 318238 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639699322 |
Product | TraB family protein |
Protein accession | YP_842752 |
Protein GI | 116753634 |
COG category | [S] Function unknown |
COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0914094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATA TAACAGAAGG ATCATCGACG GATGCAAGAA ACGAGATCTT GGTCATAGGC ACCGCACACG TATCAGAAAA AAGCGTTGCC GAGGTCAGAG AGGCCATAGA GCAGACCAGG CCGGATATCG TGGCGGTAGA GCTCTGCCAG AGGCGGTATC TCGCGCTGAC AGGCCAGGAC AGAGATGAGG ATATAAAGGT AAGCGAGCTT CTGAGCGGCG GGAGGATCTA TCTAGTTCTG GTCCAGTGGC TCCTCGCATA CATCCAGAGG CAGATAGGCT CTGAGATGGG TGTCAGGCCA GGAGCTGAGA TGCTTGCTGC CATAGAGGCT GCCAGAGTGG TCAACGCGAG AGTCGCCCTG GTCGACAGGG ATATCAGCAT AACCATTCAG CGGTTCTGGT CGGCGATGAG CATCTGGGAG AAGCTGAAGA TGCTCTGGAG CCTTGTTGTG GCTGCCCTGG GCTTTGGAAA GGAGGATCTC GATATAGACA GCGTCACGGA CTCGGATGTG GTATCCCAGC TCATGGCCGA GTTCAGGAAG ATCGCGCCGT CCGCTGCCAG GGCGCTGGTC GACGAACGGG ATGCATACAT AGCCAGGAAT CTTTATGACC TGTCGAGATA CGGAAAGGTC CTCGCGGTCG TGGGCGCCGG CCACCGTGAG GGCATAATGC GCTACCTCTC AGATCCATCG AGAATACCGG ACACGCAAAT CTTCGACGCG CCTCCTGAAA AGAGATTCAG CCTGGGCAAG GCGTTTGGCA TCATTGTTAC ACTGCTAATC ATCCTCACGT TTGTATACAT CCTGGTCGCA GGATACTCGA GCGGTGTCGT GCTCCTGGCG TTTGGCATAT GGTTCCTGGT GACCGGCGGA CTTGCAGCGC TGGGAGTCGT GGCTGCAAGA GGTCATCCTC TGTCCGTCCT CACAGCATTC ATGATCGCCT GGATGACGAC TCTGAACCCT CTGGTGGCTG CAGGATGGTT CGCCGGGATG GTCGAGGCAT GGAAGCGGAA GCCGACGATG GGGGATGTGA AGAGGCTGGC AAGTGCTGAG AGCATGGATG AGATGATGGA GAACCGCTTC TTCCGTGTGG TGCTTGTTGC AGCCCTCGCA AACCTCGGCG CAACCCTGGG CACGTTTCTC GGAATATACA TAATATGGCA GCGGATGGGC CTCATAGATC CGCATGCCAT TATTAGTCAT ATAATATGA
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Protein sequence | MADITEGSST DARNEILVIG TAHVSEKSVA EVREAIEQTR PDIVAVELCQ RRYLALTGQD RDEDIKVSEL LSGGRIYLVL VQWLLAYIQR QIGSEMGVRP GAEMLAAIEA ARVVNARVAL VDRDISITIQ RFWSAMSIWE KLKMLWSLVV AALGFGKEDL DIDSVTDSDV VSQLMAEFRK IAPSAARALV DERDAYIARN LYDLSRYGKV LAVVGAGHRE GIMRYLSDPS RIPDTQIFDA PPEKRFSLGK AFGIIVTLLI ILTFVYILVA GYSSGVVLLA FGIWFLVTGG LAALGVVAAR GHPLSVLTAF MIAWMTTLNP LVAAGWFAGM VEAWKRKPTM GDVKRLASAE SMDEMMENRF FRVVLVAALA NLGATLGTFL GIYIIWQRMG LIDPHAIISH II
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