| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0316 |
|---|
| Symbol | |
|---|
| ID | 4463294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 315923 |
|---|
| End bp | 316945 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699321 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_842751 |
|---|
| Protein GI | 116753633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000114792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTC AGACGAATCT TGAGAGGGCC GCAGACTCCT TGATAAAGTA TCTCACTGTG
AGACCCGAGG AGCTCATGCG CCAAACGGGG ATAAAGGAAA AGGACTTCGC GCCCATCGAG
CCGCAGCCGT TTGAGGGAAG GATATTCGCA GTCGACGGCT CCAACGTCAA GGTCTGCGAT
CTCTCCGTGG TCAAGGCGAA CCACATCCGC GCTGGGTATG TGGTTTACAG AGGGAGGCGG
TGGGAGAGAA CCGCTGTGAC CTATGATGAT CTCTTTGTTG CTGATAGAAG GGACTACATG
GAGTGGTTCA GGGAGCCGCT GGAGAGGCTC GAGATGGGGG AGATCGATCT GAGCGGCCTC
CGGGGGAGCG AGCTCGACAG GATCTCGACC TATTTCAGAG AGCTACAGGA GTATGTGGCG
CTTGACGCTG CGCTTTCCGA ATCCGAGGAG GGGGATCTCA TTCTTTATGA TGGCGGCTTC
GCCATATGGA AGGACCGCCC CTTCGGCAGG GTCGTAGATG AGATCATAAA GAGGGCAGCG
AAGCGCGGCG TGGATTTGCT AGGCGTGAGC AAGTCCACCA CGATATCATG GGGAGAGATT
TCAATGCCTC TCGTGTATCA CGTCTCCAGG CTCGGAAAGA ACCTGCTGCC CGGAATGGCA
TGGTGTGTGG ATCTAGGAGG AAAGAATGTC CATCCGGATC TGCAGGAAGG GCGCTGGGAG
GGGAGCATTT ACATGGTGCT GTTCCATCCA GAGGCAGACC GAGCCTTCAG GGTGGATGTT
CCTTCTTACA TGAATGGACG TGTCACCTCT GCCCTCTCAA AAGCAGCCGC TTTCTCCGGA
TCATCGGAAT CTCCCGGATA TCCCCATGCC TTATTCAGAG CACACCATGA CCTGAAGCTA
TCCTCACATG ATGGTAATAT GAGCTGGTTC AGGATGATCG ACACGATGGC AAAACGCCAC
AGTGTGAGCA TGAAGGATCT CAGAAGCGCG ATGGATTACC ACGAGATCCT GGACATATTT
TGA
|
|---|
| Protein sequence | MSAQTNLERA ADSLIKYLTV RPEELMRQTG IKEKDFAPIE PQPFEGRIFA VDGSNVKVCD
LSVVKANHIR AGYVVYRGRR WERTAVTYDD LFVADRRDYM EWFREPLERL EMGEIDLSGL
RGSELDRIST YFRELQEYVA LDAALSESEE GDLILYDGGF AIWKDRPFGR VVDEIIKRAA
KRGVDLLGVS KSTTISWGEI SMPLVYHVSR LGKNLLPGMA WCVDLGGKNV HPDLQEGRWE
GSIYMVLFHP EADRAFRVDV PSYMNGRVTS ALSKAAAFSG SSESPGYPHA LFRAHHDLKL
SSHDGNMSWF RMIDTMAKRH SVSMKDLRSA MDYHEILDIF
|
|---|
| |