| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0259 |
|---|
| Symbol | |
|---|
| ID | 4462789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 257588 |
|---|
| End bp | 259657 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699265 |
|---|
| Product | MCM family protein |
|---|
| Protein accession | YP_842696 |
|---|
| Protein GI | 116753578 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.29141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGTACG ATCCTGTTTC AAAATGGGAG GAGTTCATCC GCTCCAGGTA CTGGGACGAT
CTCCTGAAGC TTGCGGAGTC GTATCCATCA ACAAGAAGCC TGATCGTGGA TTTTGCGGAT
CTCGACAGAT ACGACACAGA GTTCGCGGAC GATCTTCTCG AGAACCCTGA TGTGATGCTG
GATGCCGCTC ACACCGCCCT TCAGGAGATA GTGCTTCCTG TGGATGTGGA TCTGAGCGGA
GCTCATGTTA GGATTGTGAA CCTGCCGCAG CACCTCAAGA CCAGGGATCT GAGAAGTGAT
CACATCGGGA AGCTAATAGC CATCGAGGGC CAGGTCAGAA CAGCGACAGA GGTCAGGCCG
AAGATAGTCA GGGCTGCATA CGAGTGCCAG AGGTGCGGGC ATGTTTTTTA TGTTGATCAG
TCCGGGACGA AGTTCATCGA GCCCTATGAG TGCCCGAACG AGGCCTGCGA CAGAAGAGGG
CCGTTCAGAC TGCTTCCGAA GAGATCGCAG TTTGTCGACG CGCAGAAGGT CCGCGTTCAG
GAATCTCCGG AGGATCTCAG GGGAGGGGAG CAGCCCCAGA CACTGGATGT GGAGCTCGGT
GACGATCTCG TGGGCAGGAT CTTCCCGGGG GACAGGGTGA TAATCAACGG GATCCTGAGA
TCATACCAGA GGACGACACA AAGTGGAAAA AGCACGTACT TCGATCTGTT TCTCGATGGA
ATAAGTATCG AGATGATGGA GCAGGAGTTC GAGGAGATCG AGATCTCCCC GGAGGATGAG
AAGCGAATTC TGGAGCTGAG CAGAGATCCT AATATTTATG AGAAGATCGT GAGATCGATC
GCCCCATCCA TCTACGGCTA TGAGGATGTG AAGGAGGCCC TGGCCCTGCA GCTTGTCTCT
GGATTCTCAA AGCGGCTTCC CGACGGGGCA AGGATCCGAG GGGATATCCA CATACTTCTG
GTGGGGGACC CAGGGGTTGC GAAATCGCAG CTTCTGAGGT ACATGGCAAA GCTCTCGCCT
AGGGGCATAT ACACATCAGG AAAGAGCTCG ACATCTGCAG GCCTCACAGC GACTGCGATA
AAGGACGAGC TCGGTGATGG GAGGTGGACC ATAGAGGCCG GGGCGCTGGT GCTCGCTGAT
AAGGGCATCG CAGCAGTGGA TGAGATGGAC AAGATGAGCC CGGACGACCG CTCTGCGCTC
CACGAGGCCA TGGAGCAGCA GACGATCAGC GTTGCAAAAG CGGGTGTCAT GGCAACGCTG
AAATCGAGAT GTGCACTTCT CGCAGCGGCG AACCCGAAGA TGGGGAGGTT TGACAGGTAC
GAGCCGATAG CGCCTCAGAT AAACCTCACC CCGGCCCTGA TGTCCAGGTT CGACCTGATA
TTCGTGCTCA CGGACGAGCC GAATGTTGAG AGAGATTCGC ACATAGCCAC ACATATTCTG
AAGAGCAACT ACGCTGGAGA GCTCACGAGT AATAAGCATA ATTCATCAAT AAACGAAGAG
GAGATCGAGA ACGCCACGGA GGTCATAAAG CCGGAGATAG AGCCTGAGCT GCTCAGGAAG
TATGTGGCCT ATGCCAGGAA GAACGTATTC CCGATGCTCA CAAGGGTGGC GATGGAGAGG
TTCAAGGAGT ACTACATCAA CCTCAGAAGC CAGGGGCAGG ATGGAAACAA GCCTGTGCCT
GTTACAGCGA GACAGCTCGA GGCGCTCATA CGTCTCGGAG AGGCGAGCGC CAGGCTGAGG
CTCAGCAACT GGATCACAGA GGAGGATGTC GATCGGGTTA TAAAAATCGT CGAGTCGTGC
CTGAAGAAGG TGGGTGTCGA TCCGGAGACG GGCATGCTGG ATGCAGACGT GATCAGCATA
GGGATCAGCA AGAGCACCAG AGACAAGACA AAACAGATGT TGAACATAAT CAAGGAGCTT
GGAGGGAAGG ATGGAGCCCA TATCGATGAT GTCCTCGATA GAGCTGAGGC GGAGGGAATA
GATAGGGATA GAGCAGAGGA GATCATCTCG CGCCTGAGGC AGGAGGGGTC CCTCATACAG
ACAAGCAGGG GTACGCTGAA GGCGGTGTGA
|
|---|
| Protein sequence | MSYDPVSKWE EFIRSRYWDD LLKLAESYPS TRSLIVDFAD LDRYDTEFAD DLLENPDVML
DAAHTALQEI VLPVDVDLSG AHVRIVNLPQ HLKTRDLRSD HIGKLIAIEG QVRTATEVRP
KIVRAAYECQ RCGHVFYVDQ SGTKFIEPYE CPNEACDRRG PFRLLPKRSQ FVDAQKVRVQ
ESPEDLRGGE QPQTLDVELG DDLVGRIFPG DRVIINGILR SYQRTTQSGK STYFDLFLDG
ISIEMMEQEF EEIEISPEDE KRILELSRDP NIYEKIVRSI APSIYGYEDV KEALALQLVS
GFSKRLPDGA RIRGDIHILL VGDPGVAKSQ LLRYMAKLSP RGIYTSGKSS TSAGLTATAI
KDELGDGRWT IEAGALVLAD KGIAAVDEMD KMSPDDRSAL HEAMEQQTIS VAKAGVMATL
KSRCALLAAA NPKMGRFDRY EPIAPQINLT PALMSRFDLI FVLTDEPNVE RDSHIATHIL
KSNYAGELTS NKHNSSINEE EIENATEVIK PEIEPELLRK YVAYARKNVF PMLTRVAMER
FKEYYINLRS QGQDGNKPVP VTARQLEALI RLGEASARLR LSNWITEEDV DRVIKIVESC
LKKVGVDPET GMLDADVISI GISKSTRDKT KQMLNIIKEL GGKDGAHIDD VLDRAEAEGI
DRDRAEEIIS RLRQEGSLIQ TSRGTLKAV
|
|---|
| |