Gene Mthe_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0188 
Symbol 
ID4462755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand- 
Start bp183448 
End bp184128 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content53% 
IMG OID639699196 
Productribosome biogenesis protein 
Protein accessionYP_842627 
Protein GI116753509 
COG category[S] Function unknown 
COG ID[COG1756] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0485311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGCA TGTTGCTTGC GGATTCTGAG CTGGAGCTCG TGCCCAGAGA GATCGTGGGG 
TATCCGGCGG TGCGGCTCAA CGCCAGGAAG CGGAACAAAT CACCGGCGAA GAGTATTCTT 
GATGCAAGTC TTCATCACTC AGCGATGCGG GCTCTCCCCA TGGGAGATCG CCGCGGGAGG 
CCGGATATAG TCCATGTCTT TCTTCTTGTG GCGCTGGAAT CTGTCCTGAA CAGGGTGGGT 
CAGCTCAGGG TTTATATCCA TACCAGAAAT AACGAGATGA TCACCATAGA CCCAACGACA 
AGGATACCCA AGAACTATCC CCGGTTTGTG GGTCTCATGG AGAGCCTCTT TGAGAAGGGC 
AGTGTTCCTG AAAGGGAGCC TCTCATTGTG ATGCAGAGGG ATCGTGATAT CGGCGCATGC 
ATAGGTGAGA TCCCGCACGA AAAGGTCATC CTTCTATCAC CGAAGGGCAG AAGGGTCAGG 
CTCAGCGATT ACGTGAAGGA GTGTGATAAC GCTCTCTTCA TACTCGGCGG CTTTCCGAAG 
GGGGAGTTCA TAAGCGATGT TCTCTCAGAA GCGGACGATA CGATATCGAT CTACGAAGAG 
AGCCTCTCGG TCTGGACCGT GGCATCTGAG ATACTCGTCA ACTACGAGAA TCATGTTCTG 
GAGGCGTCGG CTCCATCCTG A
 
Protein sequence
MISMLLADSE LELVPREIVG YPAVRLNARK RNKSPAKSIL DASLHHSAMR ALPMGDRRGR 
PDIVHVFLLV ALESVLNRVG QLRVYIHTRN NEMITIDPTT RIPKNYPRFV GLMESLFEKG 
SVPEREPLIV MQRDRDIGAC IGEIPHEKVI LLSPKGRRVR LSDYVKECDN ALFILGGFPK 
GEFISDVLSE ADDTISIYEE SLSVWTVASE ILVNYENHVL EASAPS