Gene Msil_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3905 
Symbol 
ID7092602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp4283694 
End bp4284425 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID643467190 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002364148 
Protein GI217980001 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG AAAGCAGCCG CGCAGCCCGC ATCCTTGTCG TCGAGGACGA GGCGGCCGTG 
CAACAGATGA TGGTCGACTA TCTGGAGGAG AACGGCCTGA GCGCCGTCGC CTCCTCGGAT
CTGGAAGAAA CGGCCAATCA TTTTGAAACA TCCGCGCCCG ACCTGGTCAT CCTCGATCTG
CAGCTCGGCA AGCAGGATGG ACTTGATCTG CTGCGTGAGA TTCGCTCTCA TTCGGACGTC
CCGGTGATTA TCGTGACCGG CCGTCGATGC GATGAAATCG ATCGGGTGGT CGGGTTGGAG
CTCGGCGCCG ATGACTATCT CAACAAGCCG TTCAGCCTCA AGGAGTTGCT GGCGCGCATC
CGCGCCATTA TGCGGCGGCG CGATGTCGGC GCGCCGCCTC AACAGGATCA AGAGCGCCGC
CATTATCACT TTGATGGCTG GCGCCTCGAC CATCGCGCCC GGCGTCTAAC GGACCCAAAC
GGCGTTCCGG TGGCGCTGAC GAATAGCGAA TATACGCTGC TGATTGCTTT TGTCGACGCG
CCGCAGCGCG TGCTTTCGCG CGAACAATTG CTGCAGGCGA CCCGCATGCA CGAAGATATA
TTCGACCGCA GCATTGACGT GCAGGTGCTG CGGTTGCGGC GCAAATTGGA GGATGACGCA
AGCGCGCCGC GGCTGATCCG GACGGAGCGC GGGGTGGGCT ACATGTTTGC GGCCTCGGTC
GCACGGCTTT GA
 
Protein sequence
MNHESSRAAR ILVVEDEAAV QQMMVDYLEE NGLSAVASSD LEETANHFET SAPDLVILDL 
QLGKQDGLDL LREIRSHSDV PVIIVTGRRC DEIDRVVGLE LGADDYLNKP FSLKELLARI
RAIMRRRDVG APPQQDQERR HYHFDGWRLD HRARRLTDPN GVPVALTNSE YTLLIAFVDA
PQRVLSREQL LQATRMHEDI FDRSIDVQVL RLRRKLEDDA SAPRLIRTER GVGYMFAASV
ARL