| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3874 |
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| Symbol | gltD |
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| ID | 7092570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 4246855 |
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| End bp | 4248273 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643467159 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_002364118 |
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| Protein GI | 217979971 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.134009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGG TGACAGGGTT CTTGGAGATT GACCGGCGGG ACCGGCGCTA TGCGCCCGCG
TCCGACCGGA TTCGCCATTA TAAGGAGTTC GTCATTCCGT TGTCGGAAGA GGCGACCAAG
GATCAAGCGG CCCGCTGCAT GAATTGCGGC ATTCCCTATT GCCACACCGG ATGCCCCGTC
AACAATCAGA TCCCCGACTG GAACGACCTT GTCTTTCATT CGGACTGGGA GGAGGCCTCG
CGCAACCTCC ATTCGACAAA TAATTTCCCC GAATTCACCG GCAGGGTCTG TCCCGCACCT
TGCGAGGGAT CCTGCACGCT AAACCTCAAC GACCAGCCTG TGACGATCAA GACAATCGAA
TGCGCGATCG TCGATCGAGC CTGGGCCAAT GGCTGGCTGC CGCCTGAAAT AGCGACGAAG
AAGACTGGCA AGAAGATCGC CGTCGTCGGT TCCGGCCCCG CGGGTCTCGC CTGCGCGCAG
CAGCTCGCCC GCGTCGGCCA TGAGGTGCAT GTCTTCGAGA AGAACGGCAA GCCCGGCGGG
TTGTTGCGCT ATGGCATCCC CGACTTCAAG ATGGAGAAGC ATATCATCGA CCGCCGCGTC
GATCAGATGC AGGCCGAGGG CGTCGAGTTC CACGTCAACG TCAATGTCGG GATCGACATC
GAGGCGGCGA CGCTCGTCAA TGATTATGAC GCCGTGGTGC TCGCTGGCGG CGCCGAGAAG
CCGCGCGATC TGCCGGTCCC CGGCCGCGAC CTGTCCGGCG TCCATTTCGC GATGGAGTTT
CTGCCGCAGC AGAACCGCCG CGTCAGCCGG GAGCCTGTCC AGAGCAACGA GCCGATTCTT
GCCGCAGCGA AACATGTCAT CGTCATCGGC GGCGGCGACA CCGGCTCTGA CTGCATCGGC
ACGTCGATCC GTCAGGGCGC GCTGTCCGTC ACCCAACTCG AGATCATGCC GATCCCGCCG
GAAAAGGAGA ACAAGCTCTT GACCTGGCCG AACTGGCCGC TGAAATTGCG GACCTCCTCA
TCTCAGGAAG AAGGGGCGAA ACGCGAATTC TCGGTTCTCA CCAAAGCGAT CCATGGCGAG
GACGGCGTCG TCAAGAAGAT CGTCTGCGTC CATGTCGATG AAAAACTGAA GGAAATTCCC
GGAAGCGAAT TCGACATCCG GGCCGACCTC GTCCTGCTGG CCATGGGCTT TGTCTCCCCT
GTTCAGGAAG GGATGCTGGC TTCGCTCGGC GTCGCCTTCG ATCCGCGCGG CAATGTCGCG
GCCGATCAGA CGAGCTATAA AACCTCGCTC GACAAGGTGT TCGCCTGCGG CGACATGCGT
CGCGGCCAGT CGTTGGTGGT GTGGGCCATT CGCGAGGGCC GCCAGGCGGC GCAATCGGTC
GATACGTTCC TGATGGGCGC GAGCGTGCTG CCGAGGTGA
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| Protein sequence | MGKVTGFLEI DRRDRRYAPA SDRIRHYKEF VIPLSEEATK DQAARCMNCG IPYCHTGCPV
NNQIPDWNDL VFHSDWEEAS RNLHSTNNFP EFTGRVCPAP CEGSCTLNLN DQPVTIKTIE
CAIVDRAWAN GWLPPEIATK KTGKKIAVVG SGPAGLACAQ QLARVGHEVH VFEKNGKPGG
LLRYGIPDFK MEKHIIDRRV DQMQAEGVEF HVNVNVGIDI EAATLVNDYD AVVLAGGAEK
PRDLPVPGRD LSGVHFAMEF LPQQNRRVSR EPVQSNEPIL AAAKHVIVIG GGDTGSDCIG
TSIRQGALSV TQLEIMPIPP EKENKLLTWP NWPLKLRTSS SQEEGAKREF SVLTKAIHGE
DGVVKKIVCV HVDEKLKEIP GSEFDIRADL VLLAMGFVSP VQEGMLASLG VAFDPRGNVA
ADQTSYKTSL DKVFACGDMR RGQSLVVWAI REGRQAAQSV DTFLMGASVL PR
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