Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3852 |
Symbol | |
ID | 7092548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 4218648 |
End bp | 4220108 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643467137 |
Product | hypothetical protein |
Protein accession | YP_002364096 |
Protein GI | 217979949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0376047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAATC GAGTTTTGAC ACGCCGGGTC GGCGCGCGCG CATGCGCCAT TTTAGGTCTT CTCCTTGCCG GCGCTGTTGT CGCTGGAGCG GCCGGCGCAA CGGAAGACTC GGCGCGCAAC CAGCTCGCGC AAAAGGATTG CGTGCGCGGC AAGTTCAAAG ACTATCATTT ACAGGGGACG GGCGGCGATC CGGCGGCGAG CTACAAAGGC CGCGTGTTCA GGCTCAGCCA GGACTATCCA AATCAGATTC CGCCGCGCGA AGATTTTCCG TGGGCGAAAA TCCCGTTCAA GGACGGCGGC CCGGTCGACC CCGAAGCCTA TCTGCGGGCG CTCCTCGCCT ATGGGCTGGA AGGCAATGTC GACGTCGATT TCTACGTCGA GGACAATAAA ATCCGCAAGT GGTACGGCAT GCCGTGGATG GACTGGAATA CCGAGGTCGC CTCGGATTGG CCGGGCACCG ACGGCCGCGA ATTTGTCCAT GGCTTCACCC ATGAATTCGA TTCGTCCGGC AATACGCTGA GCACGCTTCA GCATGATTTC GTCGACACCT GGTCGGGCGC CTATCTAAAC GACCGCGCCG CCTTTGGCGT CGGGCAAGTC TATTGCGATC CTGATAATCC GAAGCCCGGA GCGCTAAACC CAGATCCGGC GGGCCTCAAC GATTTTCCGG ACGGCGCCTT CATCATCAAG CTGCTGTTCT CGACGGTCAC CGAAGATCAA CTGCCGATCG CCAAGAACGC GCTGGAATGG CAGGCCCATG TCTTCGTCAA TGACGATCCG AGCTGGCGCA ACAAGGGGCC GGCCTCCCGA TTCGAGCGCG CGCTTGGGCC GATCCGCCTG ATCCAGATCG ATGTTTCGGT GCGCGACGAA CGAAGCCTGA CAGGGTGGCT TCTCGGCACT TTCGGCTATG ACGGAAACGC AAAAGGCGCG ACGCCGTGGG AGCGCATGGT TCCGTTCGGC CTCCAGTGGG GAAATAATCC CAAGGTCACT TTTGCGCAGA CCTGCGCCGG GCCGGATGGG CCGTGCGATC GCAGCAAGCT GACGGAGCAA TGGATCAACG AGGAGGCGGC CGAAAATCTC ACCCGCGCGC CGCTGAACTT CAACCATCTC GGCTTTGGCG GACGTCTCGC CGGCCCGGTC GACAACGCCA AGGCGTCCTG CATGGGATGC CATCAAACCG CGGGGTTTCC GACCGTGCCA ATCCTGCCAG AGTTTTCGGC CAATGGGGCG GTTTTGAAGC TTGACGCCGG CAAGCGGCCG GCGACCGATC AGAGCTTCCG CATGATGTAT TATGGCAATG TGCCCTCCGG CGTCGTGTTC AGCGATTCCC AGCTGCAGTC TTCGGATTAT TCGCTGCAGC TGTCGATGAG CCTGCAGAAT TACGCCTCGC GCCGCTGTGG CGATCAATCC GAGCCCTCAA GCGCGCCGGC GCCGGAAATC TGCGGGCAGC TGCTCGCCTA A
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Protein sequence | MPNRVLTRRV GARACAILGL LLAGAVVAGA AGATEDSARN QLAQKDCVRG KFKDYHLQGT GGDPAASYKG RVFRLSQDYP NQIPPREDFP WAKIPFKDGG PVDPEAYLRA LLAYGLEGNV DVDFYVEDNK IRKWYGMPWM DWNTEVASDW PGTDGREFVH GFTHEFDSSG NTLSTLQHDF VDTWSGAYLN DRAAFGVGQV YCDPDNPKPG ALNPDPAGLN DFPDGAFIIK LLFSTVTEDQ LPIAKNALEW QAHVFVNDDP SWRNKGPASR FERALGPIRL IQIDVSVRDE RSLTGWLLGT FGYDGNAKGA TPWERMVPFG LQWGNNPKVT FAQTCAGPDG PCDRSKLTEQ WINEEAAENL TRAPLNFNHL GFGGRLAGPV DNAKASCMGC HQTAGFPTVP ILPEFSANGA VLKLDAGKRP ATDQSFRMMY YGNVPSGVVF SDSQLQSSDY SLQLSMSLQN YASRRCGDQS EPSSAPAPEI CGQLLA
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