| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3753 |
|---|
| Symbol | |
|---|
| ID | 7093107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4109898 |
|---|
| End bp | 4112327 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643467038 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_002363997 |
|---|
| Protein GI | 217979850 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC CGCTGCGGAC GCCCTTCGCC GAGCCAATTC AGACGGTGGA GATCCGGGTG
CGCGGTCGCG TGCAGGGCGT CGGCTTCCGG CCGGCGATCT GGCGCATCGC CCGGAAAATC
GGGCTCGACG GCGAAACGTT CAACGACGGC GAAGGCGTGC TGATCCGGGC GCGCGGGGCA
GCCTCACAAA TTGCCGCGCT GATCGACGAC ATACGCGCCG CGCCGCCGCC CCTCGCCGAA
ATCGCCTCCA TCGACACGCG CGACTATCAT GGCGACGTCG GATCAGGCTT TGTCATCCCG
GAAAGCAGCT CGGGCGCCAC GCGCACGGAA GTCTCGCCGG ACGCCGCGAT TTGCGAGGCT
TGCGCGGCCG AAATTTTCGA TCCTTTCGTC CGCCGTTTCC GCTATCCCTT CACCAATTGC
ACTCATTGCG GGCCGCGCCT CAGCATCGTC CGCAGCGTTC CCTATGACCG CGCCACGACC
TCCATGGCGC CCTTCCCCTT ATGCGAGGCC TGCGGCGGCG AATATCGCGA TCCCGCCGAC
CGGCGCTTCC ACGCCGAGGC GACCGCCTGC CATGTCTGCG GGCCTCGGGC GAAACTGATC
CGCTTCGACG GCCGCGCCTT TTCGTTCGAG CAGCATTCGA TGCTCGACGA TGTCGATGCG
GCGCTGAGCC TCATCCAGAA AGGCGAGATT GTCGCGATCA AGGCGCTTGG CGGCTATCAG
CTCGCCTGCG ACGCGACCAA CGCCGAGGCG ATCGCAACGC TGCGCGAACG CAAGCGGCGC
GATCGAAAGC CCTTCGCGCT GATGGCGCGC GACCTCGAGG TTGTTCGCCG CTACGCGACG
GTCGGCGCTG ATGAGGCAGC CGCGCTGACG AGCCGTGAAG CGCCGATCGT GCTGCTCGTC
GCAGGCGGAA GCGAAAGACT GCCCGATCAA ATCGCGCCGG GTCTTGCCAC GCTCGGCTTC
ATGTTGCCGT CGACGCCGCT GCATCTCCTG TTGCTTCGGC GCATGACGCG GCCGGTGGTC
ATGACCAGCG GCAATCTCTC CGATGAACCG CAGGTCATAG GAGACGCCGA GGCCGCGCAA
AAGCTCTCCG CCATCGCCTC CTACGCGCTG ATCCACAACC GCGAGATCGC CAACCGCATC
GACGATTCCG TCGTGCGCCG CATGGGCGGC AGGCTGCGCG TGCTGCGCCG CGCCCGCGGC
TATGCGCCAG CTTCAATCGC CTTGCCGCAA GGGTTTGAGA AGGCGCCCGA GATTCTCGCC
TATGGCGGCG AATTGAAATC AAGCTTCTGC CTTGTCAAGG ACGGGCGCGC CGTTCTTTCG
CAGCATCAGG GCGATCTCGA AGACGCTTTG ACCTATGACG ACTACCGCAA AAACCTCGCG
CTCTACCGCG AGCTTTTCGA CCATCGGCCG ACAGCTCTCG CCGCCGATCT GCATCCCGAC
TATCTCTCGT CCAAACTCGC AAGGATGGCG GCAACAGGCG ACGGACTTCC GCTTATCGAG
ATCCAGCACC ATCACGCCCA CGCCACCGCC TGCCTGGCGG AGAATGGCCG CCCGCTTGAC
GCAGCGCCTG TCCTCGCCAT CGTGCTCGAC GGGCTCGGCT ATGGCGCGGA CGGCGCCATC
TGGGGCGGCG AGTTTTTGCT TGCTGACTAC CGCGGCTTCG AACGGATCGG AACCTTCAAG
CCGGTCGCCA TGCCGGGCGC GGCGCAGGCG GCGCGCGAAC CGTGGCGCAA TCTCTACGCC
CATCTCATGG CCGAGATGGG CTGGCCGGCG TTCGCCATGA ATTTTGCCGA GCTCGACGTC
TTTGCGGCGC TGTCGGCCAA GCCGCTGGCG ACGGTCCAAG CGATGCTGAA ATCCGCGTTC
AATTCGCCTC AAGCGTCATC TTGCGGGCGT TTGTTCGACG CTGCCGCAGC CAGCGTCGGC
CTGTGCTTCG ACCGCCAAGC CTATGAGGGC GAGGCGGCGG CGCGCTTCGA GGCTATCGTC
TCGTCGAAAA CGATGGCTGA GGAAGGCGAA GAACTCGCCT ATCCGCTGTC GATCCCCAAC
CTCAAAAGCT CCGGCCTGCC CTATATCGAG CCGCTTGGCA TGTGGAACGC GCTGCTTGGC
GATCTGATCT TGAAGACGCC GGCGCCGGTC ATCGCAGCCC GCTTCCACAA GGGCCTGGCG
CGAGCGATCG CCGCTATGGC GCTAAAGCTC GCCCGCCGCG GCGACGCTGA GGGCCGCCCG
CCGCGCTTCG ATACGATCGC GCTCTCGGGC GGCTGCTTCC AGAACAAGGT CCTGTTCGAA
AAGGTTCTTG GCCGTCTTCA GGCGCTGGAT TTCGAAGTTT TGACCCACTC CCGCACACCC
GCCAATGACG GCGGGGTCGC GCTCGGCCAG GCGGCGATCG CCGCCGCTCA TCTGATCGAC
GCCGGCGCTG ACCGACGGAA AGCGAGCTGA
|
|---|
| Protein sequence | MNTPLRTPFA EPIQTVEIRV RGRVQGVGFR PAIWRIARKI GLDGETFNDG EGVLIRARGA
ASQIAALIDD IRAAPPPLAE IASIDTRDYH GDVGSGFVIP ESSSGATRTE VSPDAAICEA
CAAEIFDPFV RRFRYPFTNC THCGPRLSIV RSVPYDRATT SMAPFPLCEA CGGEYRDPAD
RRFHAEATAC HVCGPRAKLI RFDGRAFSFE QHSMLDDVDA ALSLIQKGEI VAIKALGGYQ
LACDATNAEA IATLRERKRR DRKPFALMAR DLEVVRRYAT VGADEAAALT SREAPIVLLV
AGGSERLPDQ IAPGLATLGF MLPSTPLHLL LLRRMTRPVV MTSGNLSDEP QVIGDAEAAQ
KLSAIASYAL IHNREIANRI DDSVVRRMGG RLRVLRRARG YAPASIALPQ GFEKAPEILA
YGGELKSSFC LVKDGRAVLS QHQGDLEDAL TYDDYRKNLA LYRELFDHRP TALAADLHPD
YLSSKLARMA ATGDGLPLIE IQHHHAHATA CLAENGRPLD AAPVLAIVLD GLGYGADGAI
WGGEFLLADY RGFERIGTFK PVAMPGAAQA AREPWRNLYA HLMAEMGWPA FAMNFAELDV
FAALSAKPLA TVQAMLKSAF NSPQASSCGR LFDAAAASVG LCFDRQAYEG EAAARFEAIV
SSKTMAEEGE ELAYPLSIPN LKSSGLPYIE PLGMWNALLG DLILKTPAPV IAARFHKGLA
RAIAAMALKL ARRGDAEGRP PRFDTIALSG GCFQNKVLFE KVLGRLQALD FEVLTHSRTP
ANDGGVALGQ AAIAAAHLID AGADRRKAS
|
|---|
| |