| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3333 |
|---|
| Symbol | |
|---|
| ID | 7090830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3666438 |
|---|
| End bp | 3667214 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643466640 |
|---|
| Product | Sel1 domain protein repeat-containing protein |
|---|
| Protein accession | YP_002363601 |
|---|
| Protein GI | 217979454 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.542416 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGGC TTGAGCGACT GACAAGGGGC CGCGAAGACG TCGCCGCCGT GATGGCCAAG
GCGCGCGCGG CCGCCGACGC CGGCGATTAC GCGGCCGCGC TGGCGATATG GGGACCGCTC
GCCCACGCTG GAGTGGCGCG CGCGCAAAAC AATATCGGCG CCTGTTTTTC TGAAGGACTC
GGCGTCGCGC GCGACTCTGC CCTCGCGCTG AAATGGCTGG CCCTTGCCGC GGAAGCCGGC
GATCCGGTGG GGCAGCGGAA CCTCGCCACC GCCTATTTCA AGGGGAGCGG CGTTGAGAGC
GACGGCGTGA GAGCCGCCGA ACTCTACCGC GCCGCCGCCG AACAGGGAGA TGGGCCGGCG
CAGGACATGC TGAGCTGGAT GTTGCTCGAG GGCCGGTTGA TCCCGGCCAA TCTGGACGAA
TCGCGGCGCC TCGCGCTCGC CGCCGCCGAA AACGGCGTCG CCGCAGCGAT GGCCCGACTA
GGCATGTTCT ACCACAACGC AACCGGGGTC GAGCGGGACG CGTCGGCCGC CGTCGCCTGG
TGGCGGCGCG CCGCTTTGCT CGGCGAAGCC GATGCGCAGG CGATGCTGGG CGCGGCGCTC
CATCTGGGCG CCGGCGCGCC GGCTGATCAG AGCGAGGCGC TGATCTGGCT GCTGCGCGGA
GAGACCGGCG GCAGCGCGCT GGCCGCGCCT TTCGTCGGGG CCGCCCGCGC GGCGCTCTCG
CCGCAGCAGA TCGCAGACGC CGAAGGGCGG GCGCGGCAGA AGCTCGAGGC GGCATGA
|
|---|
| Protein sequence | MRWLERLTRG REDVAAVMAK ARAAADAGDY AAALAIWGPL AHAGVARAQN NIGACFSEGL
GVARDSALAL KWLALAAEAG DPVGQRNLAT AYFKGSGVES DGVRAAELYR AAAEQGDGPA
QDMLSWMLLE GRLIPANLDE SRRLALAAAE NGVAAAMARL GMFYHNATGV ERDASAAVAW
WRRAALLGEA DAQAMLGAAL HLGAGAPADQ SEALIWLLRG ETGGSALAAP FVGAARAALS
PQQIADAEGR ARQKLEAA
|
|---|
| |