| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3332 |
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| Symbol | |
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| ID | 7090828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3664366 |
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| End bp | 3666441 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643466639 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_002363600 |
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| Protein GI | 217979453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.665581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATTG GCGTCGCCGG CCATATCGAC CATGGCAAGA CCGCCCTCGT CAAGGCTCTG
ACAGGGGTCG AGGGCGATCG CCTCGCGCAG GAAAAAGCGC GCGGCATGAC CATCGATCTC
GGCTTTGCCT ATCTGCCGGT CGAGGGCGGA CAAACGCTCG GCTTCGTCGA TGTTCCGGGC
CATGAGCGCT TCGTGCACAC GATGCTGGCC GGCGCGAGCG GGATCGATTT CGTTCTTCTC
GCGGTCGCCG CTGATGATGG GATCAAACCG CAGACGCTGG AGCATCTCGC CATCATCGAT
CTGCTCGGCA TTGCGCGCGG CCTTATCGTC ATCACCAAGG CTGATCTTAC GGGCCCCGGT
CGGCTCGCGG AAGTGGAGGC CGAGATCCAG CGGGCGGTCG CCGGAACCGC GCTGGAGGGC
GCCGATGTCG CAGCGGTCTC GACGCTGACC GGCGCGGGGA TCGACCAACT GCGCGCCCGG
CTTGTCGCCA CAGCGATTGC GGAGACCACG CGACCGGCGC AAGGCCGCTT CCGGCTGCCG
GTCGACCGTT CCTTTACGCT GCAGGGCGTT GGCGTGGTGG TGACTGGCGC CGTTCTATCG
GGATCGGTGC ATGTCGGCGA CCATGTCATG ATCAGCCCTT CGGGCGTCCC GGCGCGCGTG
CGCTCGCTGC ATGCGCAAAA CAGACCCGCC GAGAGCGGCA GGGCGGGCGA TCGCTGCGCG
CTCAATCTCG CCGGCCCCGA CGTGTCGAAA GAGACGGTTC AGCGCGGCGA TATCGTGCTT
GACCCCGGGC TGCATGCGCC GACGGACCGT ATCGACGCCC GACTACGGAT TTTGGCTCAT
GAAGCCAAAC CGATCGGCCA ATGGTTTCCG GTGCGGCTGC ACCACGCCGC CGCCGAGGTC
GGCGCGCGCA TTGTTCTGCT CGGCGACGAG CCGATCCGGC CGGGCGCCTC GGCTGACGTC
CAGCTTGCGC TCGACGCGCC GATCGCCGCC GCGGCGCAGG ACCGCTATGT GATCCGCGAC
GTGTCGGCGC AGCGCACCAT CGGCGGGGGC GTCTTCATCG ATCTGCGTCC GCCTTTGCGA
CGCCGGCGAA CGCCCGAGCG CGCAGCGCAG CGCGCCGCGC TTGCGCTTGA AGATCCGCGC
TCGGCCTTCG GCGCTCTTTT GGAGACGGCG CCGTTTACCG CGGACCTCGC GATTTTCGCA
GGCGACCGGG TTTTGAGCGA GGCGCAGACG GAGGAGCTGG AAAAGGCGTT GAGCCTGGTC
GTTCTGCCAG CGGGCGCGAC CCGCTTCGCC ATTTCTGCCG CAAGGTGGCG AGATTTCATG
ACGAGCATCA TGGAGAGACT CTCCGCCTTT CATATCGAAA ATCCGGACCT TCAGGGAATC
GGACGGGAAA AGCTTCGGCT CTTTTTGCTC CCGCGCCTGC CCGCGCCCGC CTTCCTCGCG
GCGCTGCAAA AGGCGGCGCG GGAGATGGCG ATCGCCCTCG ACGGCTCGTT TGTCAGGCTC
GCCGCGCATG AGGCGCGTTT CGCGCCGAAG GATGAAGCGG CGTGGGAGGC CATTGCCCCG
TTGCTTGGCG GCGATGCGCG GTTTCGTCCG CCAAGGGTGC GCGATATCGC AGCGGCGACA
GGACGGCTGG AGGGCGACGT GCGCCGCCTG TTGAAGCTCG CCGGGCGGAT GGGCCTCGCG
GATGAGGTCG CGCACGACCA TTTCTTCTTG CGCCCCATCG TCCATGAAAT GACGGACATC
ATCGCTAAAC TCGCGGGCGC CCAGCCGGAC GGCGCTTTCA CGGCGGCGCA ATTTCGCGAT
CTGCTCGGCA ATGGCCGCAA GGTGGCGATC CAGATCCTCG AATTTTTCGA TCGCCATGGC
GTCACTGTGC ATAAGGGCGA TCTTCGCCGG CTGGATCCCC GCCGGCTGGA CTTGTTTGGC
GCCCCGAGGC CATCATCGGG CGCGGACGGA GGAGAATCGT CCCCGGTGGG GCGTCCGGAC
TTCAAATCCG GGTGGGGCAG CGAGACTGTT TCAGGTGGGT TCGACTCCCA TTCTCTTCCG
CCAAATTCCC TGTTCCCTCC ACGGGGTGGG ACATGA
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| Protein sequence | MIIGVAGHID HGKTALVKAL TGVEGDRLAQ EKARGMTIDL GFAYLPVEGG QTLGFVDVPG
HERFVHTMLA GASGIDFVLL AVAADDGIKP QTLEHLAIID LLGIARGLIV ITKADLTGPG
RLAEVEAEIQ RAVAGTALEG ADVAAVSTLT GAGIDQLRAR LVATAIAETT RPAQGRFRLP
VDRSFTLQGV GVVVTGAVLS GSVHVGDHVM ISPSGVPARV RSLHAQNRPA ESGRAGDRCA
LNLAGPDVSK ETVQRGDIVL DPGLHAPTDR IDARLRILAH EAKPIGQWFP VRLHHAAAEV
GARIVLLGDE PIRPGASADV QLALDAPIAA AAQDRYVIRD VSAQRTIGGG VFIDLRPPLR
RRRTPERAAQ RAALALEDPR SAFGALLETA PFTADLAIFA GDRVLSEAQT EELEKALSLV
VLPAGATRFA ISAARWRDFM TSIMERLSAF HIENPDLQGI GREKLRLFLL PRLPAPAFLA
ALQKAAREMA IALDGSFVRL AAHEARFAPK DEAAWEAIAP LLGGDARFRP PRVRDIAAAT
GRLEGDVRRL LKLAGRMGLA DEVAHDHFFL RPIVHEMTDI IAKLAGAQPD GAFTAAQFRD
LLGNGRKVAI QILEFFDRHG VTVHKGDLRR LDPRRLDLFG APRPSSGADG GESSPVGRPD
FKSGWGSETV SGGFDSHSLP PNSLFPPRGG T
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