| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3248 |
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| Symbol | |
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| ID | 7090663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3565663 |
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| End bp | 3569082 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643466556 |
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| Product | helicase domain protein |
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| Protein accession | YP_002363517 |
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| Protein GI | 217979370 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.916633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCA CCTTTCCTGC CGGAGCCTCG CGCCGGTCCG CCTCAGCGAC CGGCGTGAGC
GCTGTTCTCG GGCCCACCAA CACCGGCAAG ACGCATTACG CGATCGAGCG CATGCTCTCC
CATCCGAGCG GCATGATTGG GCTGCCGCTG CGCCTGCTCG CGCGCGAGGT CTATAATCGC
GTCGTTGAAA AAATCGGGGC CGGCGCGGTC GCCCTCATCA CCGGCGAGGA GAAGATCAAG
CCGAAGGGCG CGCGCTATTT CGTCTCCACG GTCGAGGCGA TGCCGCGCGA CCTCGATCTC
GACTTCGTCG CCGTCGACGA AATCCAGCTC GCCGCCGATC TCGACCGCGG CCACGTCTTT
ACCGACCGCC TCTTGCACCA TCGCGGCCGC TCCGAGACGC TTCTGATCGG CGCCGCCACC
ATGCACCGCC TGGTGCGCGA GCTGCTGCCC GGCGTCAGAA TCTTCGAGCG CCCCCGGCTG
TCGAAATTGA GCTTTGCCGG CGAACGCAAA ATGACGCGGC TGCCGCGGCG CAGCGCCATC
GTCGCCTTCT CCGCCGAGGA CGTCTACGCC ATCGCCGAAT GGATCCGGCG CCAGCGCGGC
GGCGCCGCCG TCGTGCTCGG GGCTCTCTCG CCGCGCACGC GCAACGCCCA GGTCGATATG
TTCCAGAACG GCGACGTCGA CTACATCGTC GCGACGGACG CCGTCGGCAT GGGACTGAAC
CTTGACGTCG AGCACATCGC CTTCGCCTCC GACCGCAAAT TCGACGGCTG GCAGTTCCGC
CGCCTGACCC CGGCGGAATT CGGCCAGATC GCCGGCCGGG CCGGGCGACA CATGCGCGAC
GGGACCTTCG GCACCACCGG ACGCTGCCCG CCCTTCGACG AAGATCTCGT CGAAGCGCTG
GAGGAGCATC GCTTCGACAG CGTCAGAATG CTGCAATGGC GCAACGCCAG CCTCGACTTT
TCCTCGATCC ACAGCCTCGC CGCCTCGCTC GACGTGCTCC CGAACGCGCC AGGATTAACG
CGCGCGCCGC TCGCCGAGGA CCAGATGGTG CTCGACATCG CCTCGCGCGA CGAAAAAATC
ATGCGCGAGG CGGCGACGAA AGCCGACGTC GCCCGGCTGT GGGACTGTTG CCAGATCCCG
GATTATCGTA AGCTGTCGCC CGCTGCGCAT GCGGAGCTTG TCCTGTCGGT CTACGGGTTC
ATTGTGCGCG CAGGGCGGAT TCCCGACGAT TGGTTCGCCC GCCACATCAG AGCTCTGGAC
CGGATCGACG GCGACCTCGA CGCTTTGTCC GCGCGGATCG CGCAGGTCCG CACCTGGACC
TTTATCGCCA ACCGATCCGA CTGGCTCCTT GATCCTGACC ATTGGCAGGG GGTCGCGCGT
CAGGTAGAGG ACACCTTGTC GGACGCTTTG CACGCCCGTC TCGCCCAGCG GTTCGTCGAC
CGAAGGACGA GCGTGCTGAT GCGCCGCCTC AGAGAGAACG CCATGTTGGA AGCGGAAGTC
ACGAATAGCG GCGATGTGAT CGTCGAGGGC CAGCACGTTG GCCAGCTCAA CGGCTTTCGC
TTCACCCCCG ACCCGCAAGC GGTCGGGGAA GCCGCCAAGG CGCTCAACGC CGCGGCGCAG
AAAGCGCTCG CCAGCGAGAT CGAAGGCCGC GCCACGCGCG TGCATGAGGC TGTCGACGAG
GCGTTTGTCC TCGCCAATGA CGGGATAATC CGCTGGCTCG GCGAACCGGT CGCGAAAATC
TCCGCCGGTC CGCATGTCCT CGAGCCGACG CTGCGCATCC TGGCCGACGA GCAGCTCACC
GGCCCGGCGC TCGAAAACGT CCAGCGGCGG CTCGAACTCT GGCTGGCGCA GCACGTCAAG
AAGCTGCTCG GCCCGCTCGT CGATCTCGAA AAGGGCGAGG GTCTTGAGGG GCTTGCGCGC
GGCGTCGCGT TCCAGATCGC GGAATCGCTC GGCGTCCTCG ACCGCGCCAA GGTCGCCGAG
GACGTCAAGG CGCTGCCGCA GGAAGCGCGC GGCGCGCTAC GGAAATTCGG CGTCCGCTTC
GGCGCCTATC ATCTTTATCT TCCGGGCCTC GTCAAACCGG CGCCGCGCGC CCTTGCGGCC
CAGCTCTGGG CTTTGACCAA TGGCGGCGTC GAGGAGATCA AGGGCATCGA CGACGTGCCT
CATCTCGCCG CTTCCGGCCG CACCTCCTTT GTCGCGGACA AGGACGTTCC CAAGGGATTT
TACCGCGCCG CTGGTTTTCG CGTCTGCGGC GAGCGCGCCG TCCGCGTCGA CATCCTTGAA
CGCCTGGCCG ATCTGATCCG GCCGGCGATC GCCTATCGCC CGGGCGCCAC CGCCGGCGAC
CCGCCGGCCG GCGCCGCCGA CGGCGACAGC TTCATCGTCA CCGTCGGAAT GACCTCTCTT
GCCGGCTGCT CCGGCGAAAG CTTCGCCTCC ATCCTGCGCT CGCTCGGCTA TGTCGTCGAG
CGGAGGCAGG GACCGGCGAT CACCGTTCCC CTGCTGCCAA AAGCCGCGAC CGAACCGCTT
ACGCCGCAGG CGGCCGAGGC CGCGCCTTCA GCCGAGCCGG ATGGAGCGAT CGAAACCGAC
CATTGCGCCC TTGAACCGGC AGAAGCCCAT GAAGACGCCG CCGGCGTCGA TACAACCGAG
ACGGAGACGG CGGCGGCGGA GCCGGACAGC GGCGAGACGA ATCTGCAGGA CGACGTCGCG
GCGGTAGGGG CGCCGGAGCC GGACGCTCCG GTCGCTGAGG CCGCGCCCGA CGCCACGCCA
GAACTCCAGG CTGTCGCCGA GGCGGAGCAC ATCGCCACGC CGGAGCAACT CGTGGAGCCG
CAGGCCGACG ACGAGAACGC CGCTCAAGCG TCGGGCGACG CCGCTGACCC GACCGCAGAA
CTGGCTCCCG ATCTGGCCGG GACCGAGGCG GAGCCGGCGG AAGCAGAGCC CGTTCTGATC
GAAGTCTGGC GCCCCCACCG GCAGCATTTC CATGCGCGCC GGCCCGAGGC CCGCGCCGCC
AAGCGCCCGG AGCGGCGCCG CGCCGCGCCG CAAGGCGAAA CGCCCGAACT GGCGGCTGCT
GCGCCGGAAG CGGGCGCCGC CGAGCCCCGC GCCAATCATT CCCGGCCGCG CAACGGCCGC
GGAGGCGCCA ATCCGGAACA GGGCGGGCGG GAGCGCCAAG GCGGCGGCCC TTCCGGCGCT
CATGCGGGCG GCCCCGGAAA GCCCAGCCGC GGCCAGGGAC GTCCCAACGA CCGCGACCGG
CGCGAGAGCC AGGGCGCGGC GAGCAGCCGG CCGCAGGATA ATGACCGCCG GCCGCAGCGC
GGCTCCTTTG CCACACCACA GAAGAAATCC TACGATCGGC CGCCCGATCC CAATTCCCCC
TTTGCGAAGT TGCTTGTGCT GAAAGCCAGC ATGGAGGAAA AAAACAAGCA GGATAGCTGA
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| Protein sequence | MNVTFPAGAS RRSASATGVS AVLGPTNTGK THYAIERMLS HPSGMIGLPL RLLAREVYNR
VVEKIGAGAV ALITGEEKIK PKGARYFVST VEAMPRDLDL DFVAVDEIQL AADLDRGHVF
TDRLLHHRGR SETLLIGAAT MHRLVRELLP GVRIFERPRL SKLSFAGERK MTRLPRRSAI
VAFSAEDVYA IAEWIRRQRG GAAVVLGALS PRTRNAQVDM FQNGDVDYIV ATDAVGMGLN
LDVEHIAFAS DRKFDGWQFR RLTPAEFGQI AGRAGRHMRD GTFGTTGRCP PFDEDLVEAL
EEHRFDSVRM LQWRNASLDF SSIHSLAASL DVLPNAPGLT RAPLAEDQMV LDIASRDEKI
MREAATKADV ARLWDCCQIP DYRKLSPAAH AELVLSVYGF IVRAGRIPDD WFARHIRALD
RIDGDLDALS ARIAQVRTWT FIANRSDWLL DPDHWQGVAR QVEDTLSDAL HARLAQRFVD
RRTSVLMRRL RENAMLEAEV TNSGDVIVEG QHVGQLNGFR FTPDPQAVGE AAKALNAAAQ
KALASEIEGR ATRVHEAVDE AFVLANDGII RWLGEPVAKI SAGPHVLEPT LRILADEQLT
GPALENVQRR LELWLAQHVK KLLGPLVDLE KGEGLEGLAR GVAFQIAESL GVLDRAKVAE
DVKALPQEAR GALRKFGVRF GAYHLYLPGL VKPAPRALAA QLWALTNGGV EEIKGIDDVP
HLAASGRTSF VADKDVPKGF YRAAGFRVCG ERAVRVDILE RLADLIRPAI AYRPGATAGD
PPAGAADGDS FIVTVGMTSL AGCSGESFAS ILRSLGYVVE RRQGPAITVP LLPKAATEPL
TPQAAEAAPS AEPDGAIETD HCALEPAEAH EDAAGVDTTE TETAAAEPDS GETNLQDDVA
AVGAPEPDAP VAEAAPDATP ELQAVAEAEH IATPEQLVEP QADDENAAQA SGDAADPTAE
LAPDLAGTEA EPAEAEPVLI EVWRPHRQHF HARRPEARAA KRPERRRAAP QGETPELAAA
APEAGAAEPR ANHSRPRNGR GGANPEQGGR ERQGGGPSGA HAGGPGKPSR GQGRPNDRDR
RESQGAASSR PQDNDRRPQR GSFATPQKKS YDRPPDPNSP FAKLLVLKAS MEEKNKQDS
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