| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2912 |
|---|
| Symbol | tig |
|---|
| ID | 7092830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3206718 |
|---|
| End bp | 3208106 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643466223 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_002363190 |
|---|
| Protein GI | 217979043 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCA CGGAAACCCT TTCGCAGGGC CTCAAGCGCG AGTTTCAGGT GGTGCTTCCC
GCGACCGACC TCGCAACTCG CCTCGACAGC CAGCTTGCCG AAATGCGGGC GAAGGCCCGT
ATCAACGGGT TCCGTCCTGG CAAGGTGCCG GTCGCCCATC TGAAGCGGCT TTATGGCCGC
TCGATCATGG CTGAGGTCGT GCAGGAAGCG GTGAACGAAG CGCATCGCAA GATCATCGAG
GACAATGCGC TGCGTCCCGC CTCGCAGCCG AAGATCGATT TTCCCGGCGA AAAGGATGAA
CTCGAAAAGG CGTTCGAGGC GAAGGCGGAC TTTGCCTTTA CGGTCGCCCT CGAAGTGCTT
CCCAAGATCG AAATCGGCAG CTTTGAGGGC GTCGAGATCG AACGCCTCGT CGCCGCGGTC
AGCGAGGACG AGATCGACCT TGTGGTGAAC CGGCTGGCCG AGCAGAGCCG CCCCTATACG
CCGAAAGAGG GCGACGGCGT CGTCGCCACG AAGGGCGACA AGGCGACGAT CGATTTCGTC
GGAAAGATCG ACGGCGAAGC GTTCGAGGGC GGTTCGGGCG AGGGCGTCGA TCTCGTGCTC
GGCAGCGGCA GCTTCATTCC GGGCTTCGAG GAGCAGCTCG AAGGGCTCAA GCTCGGCGAC
AGCCGCACTG TGACCGTGAC TTTTCCGGAC GATTATTCCG CCGCGCATCT CGCCGGCAAG
GAAGCCGTCT TCGACGTCAC GCTCAAGGCG CTGGCCGCGC CTGGCGAAAC CGTGATCGAC
GACGCATTCG CCAAGGGCTA CGGCCTCGAG GATCTCACCA AGCTCAGAGA GTCGATCAAG
GCCAATATCG AGCGCGATTA CGCCGCCGCC TCGCGCCGCA AATGGAAGCG GGCGCTTCTC
GACGCGCTCG ACGCCAAATA CGCCTTCGAT CTTCCCGAGG GCCTCGTCGC CCAGGAATTC
GACGCAATCT GGCGCCGGGT CGAGGCCGAA CAGAGCCAGA GCGGGCGCAG CTTTGCCGAC
GAGGGCACGA CCGAAGAGGC GGCGCGAGCG GATTATCGCA AGATCGCCGA GCGGCGCGTG
CGGCTCGGCC TGCTGCTCGC CGACGTCGGC GATGCGGCGG GCGTCAAGGT GGCCGACGAA
GAGGTCAACC AGGCGCTGTT TGAGCGCGCC CGGTCCTTCC CCGGCCAGGA AAAGATGGTG
TGGGATTATT ATCAGAAGAA CCCTTCGGCG CTCGCCGAGC TGAGGGCGCC GATTTATGAG
GAAAAGGTCG TCGACCACAT CCTTTCCCTC GTCAAGGTGA CCGACAAGGC GGTCCCGAAG
GAGGAGCTCC TCGCCGCCGA TGAGGAGGAC GAGGAGGAAG CGGCCGAGTC GAGCGCGGCG
CTGGTCTGA
|
|---|
| Protein sequence | MQVTETLSQG LKREFQVVLP ATDLATRLDS QLAEMRAKAR INGFRPGKVP VAHLKRLYGR
SIMAEVVQEA VNEAHRKIIE DNALRPASQP KIDFPGEKDE LEKAFEAKAD FAFTVALEVL
PKIEIGSFEG VEIERLVAAV SEDEIDLVVN RLAEQSRPYT PKEGDGVVAT KGDKATIDFV
GKIDGEAFEG GSGEGVDLVL GSGSFIPGFE EQLEGLKLGD SRTVTVTFPD DYSAAHLAGK
EAVFDVTLKA LAAPGETVID DAFAKGYGLE DLTKLRESIK ANIERDYAAA SRRKWKRALL
DALDAKYAFD LPEGLVAQEF DAIWRRVEAE QSQSGRSFAD EGTTEEAARA DYRKIAERRV
RLGLLLADVG DAAGVKVADE EVNQALFERA RSFPGQEKMV WDYYQKNPSA LAELRAPIYE
EKVVDHILSL VKVTDKAVPK EELLAADEED EEEAAESSAA LV
|
|---|
| |