Gene Msil_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2714 
Symbol 
ID7092167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2972844 
End bp2974025 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content63% 
IMG OID643466028 
Productpolysaccharide export protein 
Protein accessionYP_002362998 
Protein GI217978851 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAATG ACTTTGCAAA CGTCGCGCGC ATTCTGCTTT CCGGCGCGAT CGCGGTCGCT 
CTGACCGGCT GCGCGACGAT TCTGCCCGGA TCGGGGCCGA GCAACGACGA CGTCGTGGCT
CAATCTTCCT ATCCCGGCTT CCAGCGCTAC GAAGTCATCG ACATCAATTC CTCCGTCCTC
GACATATTGC GCCATCGCGA AGCGGACAGT TTTCTGGCCC ATTTTGGCGA TTACAGACCC
TCGGTCGAGC CGAAAATCGG CGTTGGGGAC ACGGTTTCCG TGACCATTTG GGAGGCCGGC
GCCGGCGGAC TATTCTCCGC GCCGCTGGTC AGCGACCGCT TCAGCACCGG CTCGAAGAGT
TCGACGATTC CCGATCAGAT CGTCGGCCGC GATGGTTCGA TCAGCGTGCC TTACGCGGGA
CGCGTCAGGG TGGCGGGGCG CACGACGCAG GAGGTGCAGA TCATTGTCGA ACGCGCGCTG
GCGGGCAAGG CGATCGAGCC GCAGGTTTTG ATCAATATGC CGAGGTCGGT CAGCAATAGC
GTCACCGTCA CGGGAGAAGT GGCCAATGGC GCGCGCGTGC CCCTGAGCGT CAGGGGCGAT
CGCGTCATGG ACGTCATCGC AACGGCGGGC GGAATTCGCG CTCCAGTGAA CGAAACCTAT
GTTCAGCTCT CGCGCGGACG CGAGACGGTT CGCGTCGCGA TGACGCGCGT CTCTGCCGAT
CCACGAGAAA ACATCTTCAT GCGCCCCAAC GACGTATTGA CGTTGATCCG GGATCCGCAA
ACCTTCATCG CCTATGGCGC GACGGGCCGC AACGCCGAGA TCCCCTTCGA CGCCGAAGGC
ATCAGCCTCT CGCAGGCGCT GGCCAAGGCG GGGGGACTGC TGGATTTTCG CTCGGATCCC
GCCGGCGTCT TCGTCTTCCG TTTCGAGCCT GAAAGCGTCG TTCGCGCGCT CAACCCGAAC
ACGACCATCG CCGCGCCGCA TCAGTTGACG CCGGTCGTGT ACCGGCTGAA CCTGCGCGAC
GCCGCGAGCC TGTTCGTCGC CCAGGGCTTC CGCATCCAGA ACCGCGATCT GCTCTACGTC
TCCAATGCGC CAATCACCGA CGCGCAGAAA GTCATGGAAG TCGTTGGCCT GATCTCCGGG
CCGACGACGA CTGGCCTTGC AGCCTATTCC TTCGTCAAAT AG
 
Protein sequence
MRNDFANVAR ILLSGAIAVA LTGCATILPG SGPSNDDVVA QSSYPGFQRY EVIDINSSVL 
DILRHREADS FLAHFGDYRP SVEPKIGVGD TVSVTIWEAG AGGLFSAPLV SDRFSTGSKS
STIPDQIVGR DGSISVPYAG RVRVAGRTTQ EVQIIVERAL AGKAIEPQVL INMPRSVSNS
VTVTGEVANG ARVPLSVRGD RVMDVIATAG GIRAPVNETY VQLSRGRETV RVAMTRVSAD
PRENIFMRPN DVLTLIRDPQ TFIAYGATGR NAEIPFDAEG ISLSQALAKA GGLLDFRSDP
AGVFVFRFEP ESVVRALNPN TTIAAPHQLT PVVYRLNLRD AASLFVAQGF RIQNRDLLYV
SNAPITDAQK VMEVVGLISG PTTTGLAAYS FVK