| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2463 |
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| Symbol | |
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| ID | 7091015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2687922 |
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| End bp | 2691158 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643465784 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002362754 |
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| Protein GI | 217978607 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTT CTCATTTCTT CATCGACCGT CCGATCTTCG CCGCGGTTTT GTCGATCATT
CTAACGATCG CCGGCGCCAT CGCGCAAAGA TCGCTGCCCG TCTCCGAATA TCCGGAGATT
GCGCCGCCGA CGGTCAACAT CACGACGACC TATCCGGGCG CCTCCGCCGA AGTCATCGCG
GCGACCGTCG CGACGCCGAT CGAGCAGCAG GTCAACGGCG TCGACGACAT GCTCTACATC
ACCTCGCAGT CGACCGGCGA CGGGCGGCTC TCGATCGACG TGACGTTCAA GCCCGGCACG
AATGTCGATC AGGCGCAGGT GCTGGTGCAA AATCGCGTCG CCATTGCGAC GCCGCGTCTG
CCCGAGCCGG TGATCCGGCA GGGCGTCACC GTGCAGAAGG CCTCGCCCGA CCTCATGATG
GTCGTGCATC TGATCTCGCC CGACGGATCG CGCAGCCAGC AATATATCTC CAATTATGCG
ACGCTCTATC TCAAGGATTC GCTGGCGCGC GTTGACGGCG TCGGCCGCGT CGATATTTTC
GGCGCGCGCG ACTACGCCAT GCGCATCTGG CTCGATCCGG CGAAAGTCGC CGCGCGCAGC
CTGACCGTCG AGGAAGTCGT CGCCGCCTTG CAGGCCGCCA ATCTTCAGGT CGCGGCGGGC
GCCATCAACC AGCCGCCGGT CTCCTCGCCA TCCGCCTTCC AGCTGTCGGT GCAGACGCTG
GGACGCCTGA CCGATCCGGC CCAGTTCGAG GACATCGTCA TCAGGTCCGA CGCCGACGGC
TATGTCCGCG TGCGCGACAT CGGCCGCGTC GAGCTTGGCG CGCAGGATTA TACCGTCAAC
GCCTATCTCG ACCGCGACGT CGCGACGGCG ATGGTGATGT TCCAGCGGCC CGGCTCGAAC
GCGCTGGCGA CCGCGGCTGC GGTGCTCGCC GCTATGGAGA CGGCGAAGAA GGATTTTCCG
CCCGGCATCG ATTATACCGT CGTCTATAAT CCGACCGAGT TCATTCAGCA GTCCGTCGAC
GAGGTCGTGC ACACGCTTTA TGAGGCGATC GGCCTCGTCG TGCTCGTCGT CATCGTCTTC
CTGCAGACCT GGCGCGCGGC GATTATTCCC GTCATCGCCA TCCCGGTGTC GCTGATCGGC
TGCTTCCTGT TCATGAGCGG CGTCGGCCTC ACCTTCAACA CGCTATCCCT GTTCGGCCTC
GTGCTGGCGA TCGGCATCGT CGTCGACGAC GCGATCGTCG TCGTGGAAAA TGTCGAACGC
TATCTCGAAC ATGGCGCTGC GCCGAAAGAC GCCGCGCATA AGACGATGGA CGAGGTGGGC
GGCGCGCTGC TCGCGATCGC CCTCGTGCTT TGCGCGGTGT TCATCCCGAC CGCCTTCATC
ACCGGTCTGC AAGGCGCCTT CTACAAGCAG TTCGCCATCA CCATCGCCAG CGCAACGGTC
ATCTCGGCCT TTGTGTCGCT GACCCTGTCT CCGGCGCTCG CCGCCATTCT GCTCAAACAG
CGCGACCAGA ACCCGAAAAA ATCCGGATTT CTCTATCGTC TCGCAACGCC GCTTCGCTGG
TTCTTCGCCG GCTTCAACTG GGTCTTTGAA AAGCTTAGCG CCGGCTATGG GGCGCTGACG
GCGCGCTTGA TCCGGATCAG CGTCGTCGTC CTGATCGTCT ATGCGGGGCT CATCTATTTC
GCCTTCGATA TTCTGAACAA GACGCCGACA GGGCTCATTC CGCAGCTCGA TCGCGGCTAT
CTTATCGCCG CCTTCCAGCT TCCGCCCGGC TCCTCGCTCG ACCGCACCGA CAAGGTGCTG
CGGCAGGCGA CCGACATTAT CTTGCAGCGC CCCGGCGTCG AACATGCGGT GGTTTTCGCC
GGCTTCGATG GCGCGACTTT CACCAACGCC ACCAACACCG GCGTCATCTT CGTCGCGCTG
AAGCCATTCA AAGACCGCGT CCCGGCGGGG CTGACGGCCC CCAAAATTCT GGCCGACGTG
CGCCAGCATA TTGCGGTTCT GACCGACGCC TTCGCCTTCG TGCTGGAGCC GCCTTCGGTT
CCGGGCATCG GCACCGGCGG CGGCCTCAAG GGTTATGTGC AGGACCGATC GGGCCGCGGC
CTGCCCGCGC TGGAAGGCGC GACCTGGGGC CTCGTCGGGG CGATCCACCA AAATCCGGGG
TTCGTCCAGG CCTTCACTTT GTTCAACACC AAGACGCCGC AGATCTACGC CGATATCGAT
CGCACCAAGG CTGAGCTACT TGGCGTGCCG ATCTCGCGCG TGTTCGACAC GCTCTCCGTC
TATATGGGCT CCGCCTATAT CAATGATTTC AATATTCTCG GGCGCACCTA CCAGGTCACG
GCGCAGGCCG ACAATCCCTA TCGGCTGACG ACGCGCGACG TCGCCAACCT CAAGACGCGC
AACGCCAATG GCGATATGGT GCCGATTGGT TCGGTCGCCT CGCTGAACGA CACGACCGGG
CCGTTCCGCG TCACGCGCTA TAACCTCTAT CCCGCGGCCG AGGTGCAGGT CGCTCTGGCG
CGCGGATTCT CGTCGGGGCA GGGCATCGCC GCGATCGAGG CGCTCGCCAA ACAAACCCTG
CCGCAGGGCT TTGGCTTCGA ATGGACCGAA ATCGCGCTGC AGGAAAAGCT CGCGGGCAAT
ACGGCGATCC TCGCCTTTGG CCTTGCCGTC GTCTTCGTCT TCCTGCTGCT CGCCGCGCTC
TATGAAAGCT GGGCGTTGCC CTTCGCGGTC ATTCTGATCG TGCCGATGTG TATTCTGGCG
GCGATGATCG GCGTCACCTG GCGCGACTTC GACCGCAACA TTCTGGTCGA CATCGGCCTT
GTGGTGCTGG TCGGCCTTGC CGCCAAAAAC GCGATTTTGA TCGTCGAATT CGCCAAGCAG
GCGGAGGAGG AGGGGCACAC CCGCTTCGAG GCCGCGGTGT CGGCGGCGCG GACAAGATTG
CGGCCGATCC TGATGACCTC CTTCGCCTTC ATCTTCGGCG TTCTGCCGCT CGCCCGGGCG
GAGGGCGCCG GCGCCGAAAT GCGCCAGTCG CTCGGCACGG CGGTGTTCGC CGGCATGCTC
GGCGTGACGA TGTTCGGCCT TCTGTTCACC CCGACCTTCT ATGTCGTGGT GCGCGGGATC
TCGCTGCGGC TCGAGCGTTT GCGCGGCAAG AAGACGCCCC CGCCGCCGGG AGGCGAACAT
GGCGGCCGCG GCGACGAACA CAAGGCGATG GTGGTGAAAG AGCCGGCGGG GAGTTGA
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| Protein sequence | MRFSHFFIDR PIFAAVLSII LTIAGAIAQR SLPVSEYPEI APPTVNITTT YPGASAEVIA
ATVATPIEQQ VNGVDDMLYI TSQSTGDGRL SIDVTFKPGT NVDQAQVLVQ NRVAIATPRL
PEPVIRQGVT VQKASPDLMM VVHLISPDGS RSQQYISNYA TLYLKDSLAR VDGVGRVDIF
GARDYAMRIW LDPAKVAARS LTVEEVVAAL QAANLQVAAG AINQPPVSSP SAFQLSVQTL
GRLTDPAQFE DIVIRSDADG YVRVRDIGRV ELGAQDYTVN AYLDRDVATA MVMFQRPGSN
ALATAAAVLA AMETAKKDFP PGIDYTVVYN PTEFIQQSVD EVVHTLYEAI GLVVLVVIVF
LQTWRAAIIP VIAIPVSLIG CFLFMSGVGL TFNTLSLFGL VLAIGIVVDD AIVVVENVER
YLEHGAAPKD AAHKTMDEVG GALLAIALVL CAVFIPTAFI TGLQGAFYKQ FAITIASATV
ISAFVSLTLS PALAAILLKQ RDQNPKKSGF LYRLATPLRW FFAGFNWVFE KLSAGYGALT
ARLIRISVVV LIVYAGLIYF AFDILNKTPT GLIPQLDRGY LIAAFQLPPG SSLDRTDKVL
RQATDIILQR PGVEHAVVFA GFDGATFTNA TNTGVIFVAL KPFKDRVPAG LTAPKILADV
RQHIAVLTDA FAFVLEPPSV PGIGTGGGLK GYVQDRSGRG LPALEGATWG LVGAIHQNPG
FVQAFTLFNT KTPQIYADID RTKAELLGVP ISRVFDTLSV YMGSAYINDF NILGRTYQVT
AQADNPYRLT TRDVANLKTR NANGDMVPIG SVASLNDTTG PFRVTRYNLY PAAEVQVALA
RGFSSGQGIA AIEALAKQTL PQGFGFEWTE IALQEKLAGN TAILAFGLAV VFVFLLLAAL
YESWALPFAV ILIVPMCILA AMIGVTWRDF DRNILVDIGL VVLVGLAAKN AILIVEFAKQ
AEEEGHTRFE AAVSAARTRL RPILMTSFAF IFGVLPLARA EGAGAEMRQS LGTAVFAGML
GVTMFGLLFT PTFYVVVRGI SLRLERLRGK KTPPPPGGEH GGRGDEHKAM VVKEPAGS
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